RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DEFB119Q8N690 84 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZNF321PQ8N8H1 164 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 GATSQ8NAP1 163 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR4D9Q8NGE8 314 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR51L1Q8NGJ5 315 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR2G2Q8NGZ5 317 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZNF519Q8TB69 540 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZFAND1Q8TCF1 268 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 RNF138Q8WVD3 245 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 NAT6Q93015 286 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 YIPF5Q969M3 257 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 MIB2Q96AX9 1013 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 SCMH1Q96GD3 660 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 RADILQ96JH8 1075 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 RNF170Q96K19 258 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR8B4Q96RC9 309 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 MED28Q9H204 178 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 TTYH1Q9H313 450 aaPredicted RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 FANCFQ9NPI8 374 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 C2orf42Q9NWW7 574 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FRRS1LQ9P0K9 344 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 C19orf25Q9UFG5 118 aaPredicted RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 MRM2Q9UI43 246 aaKnown RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 NXT1Q9UKK6 140 aaKnown RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 COPS3Q9UNS2 423 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 B9D1Q9UPM9 204 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FOXJ3Q9UPW0 622 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ATG2BQ96BY7 2078 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 A0A0A6YYH2 397 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 OR2W5A6NFC9 320 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 A6NJ64 397 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ACOT7O00154 380 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 PIN1P1O15428 100 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 SERPINI2O75830 405 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 KRT33AO76009 404 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 AQP8O94778 261 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 PAHP00439 452 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 HRGP04196 525 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 F13BP05160 661 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 CD2P06729 351 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 HEXBP07686 556 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 C4BPBP20851 252 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 MST1P26927 711 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 GPR85P60893 370 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 DCDP81605 110 aaKnown RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 GLO1Q04760 184 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 SLC17A1Q14916 467 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 CCDC85BQ15834 202 aaPredicted RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 NKAIN1Q4KMZ8 207 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 SLC25A53Q5H9E4 307 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 STAC2Q6ZMT1 411 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 IDO2Q6ZQW0 420 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ASB18Q6ZVZ8 466 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ZNF767PQ75MW2 155 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 H1FNTQ75WM6 255 aaPredicted RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 LINGO2Q7L985 606 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 KRT74Q7RTS7 529 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ANKRD37Q7Z713 158 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 MARCH3Q86UD3 253 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ADGRG3Q86Y34 549 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 CCDC28AQ8IWP9 274 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 CMTM4Q8IZR5 234 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ZNF676Q8N7Q3 588 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ADPRHL1Q8NDY3 354 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 NLGN4YQ8NFZ3 816 aaPredicted RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 STT3BQ8TCJ2 826 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 RNF128Q8TEB7 428 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 MCHR2Q969V1 340 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 UPRTQ96BW1 309 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 DDIT4LQ96D03 193 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 HAVCR1Q96D42 359 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 NXPE2Q96DL1 559 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 MRGPRX4Q96LA9 322 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 ZFP3Q96NJ6 502 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 LMF1Q96S06 567 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 PDCD1LG2Q9BQ51 273 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 PTDSS2Q9BVG9 487 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 CACNG6Q9BXT2 260 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 SLC26A1Q9H2B4 701 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 RANGRFQ9HD47 186 aaPredicted RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 SERINC1Q9NRX5 453 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 DHCR7Q9UBM7 475 aaKnown RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 CKLFQ9UBR5 152 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 IKZF2Q9UKS7 526 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 FBXL3Q9UKT7 428 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 RARRES3Q9UL19 164 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 B3GALT5Q9Y2C3 310 aa7.51□□□□□ -1.21
SPG11-209ENST00000558253 RBMX2Q9Y388 322 aaKnown RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 AK6Q9Y3D8 172 aaKnown RBP7.51□□□□□ -1.21
SPG11-209ENST00000558253 A0A0B4J293 547 aa7.5□□□□□ -1.21
SPG11-209ENST00000558253 A0A1B0GVT2 93 aa7.5□□□□□ -1.21
SPG11-209ENST00000558253 VSTM2BA6NLU5 285 aa7.5□□□□□ -1.21
SPG11-209ENST00000558253 ANXA2P2A6NMY6 339 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms