RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC30A7Q8NEW0 376 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 OR52P1PQ8NH57 321 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PNPT1Q8TCS8 783 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 GTF3AQ92664 365 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 SLC38A4Q969I6 547 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 KTI12Q96EK9 354 aaPredicted RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 C3orf30Q96M34 536 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TSPAN32Q96QS1 320 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 DCLRE1CQ96SD1 692 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 FOXB1Q99853 325 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SLC35A5Q9BS91 424 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 MECRQ9BV79 373 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 EMC6Q9BV81 110 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ULBP2Q9BZM5 246 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 KCNF1Q9H3M0 494 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 C1orf198Q9H425 327 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NANOGQ9H9S0 305 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 TCF7L1Q9HCS4 588 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NOX4Q9NPH5 578 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 CYSLTR2Q9NS75 346 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NOP53Q9NZM5 478 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 CALML5Q9NZT1 146 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 B3GAT1Q9P2W7 334 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 EIF3KQ9UBQ5 218 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 RPS6KB2Q9UBS0 482 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 EGFL7Q9UHF1 273 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 IL20RAQ9UHF4 553 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 RNF114Q9Y508 228 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NPTNQ9Y639 398 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 CACNG2Q9Y698 323 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 NOTCH1P46531 2555 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TRAV36DV7A0A075B6V5 113 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CCDC154A6NI56 674 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SRRM5B3KS81 715 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TMEM233B4DJY2 109 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 M0R082 166 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 PIN1P1O15428 100 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 RIPK2O43353 540 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 HOXA3O43365 443 aaPredicted RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 MGRN1O60291 552 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 UBOX5O94941 541 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 KRT75O95678 551 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SNAP29O95721 258 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 IGHV1-46P01743 117 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CHRNGP07510 517 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 MYZAPP0CAP1 466 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CCL2P13500 99 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 NQO1P15559 274 aaKnown RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 MAKP20794 623 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 GRPRP30550 384 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CD80P33681 288 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 S100A3P33764 101 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 APLNRP35414 380 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CSNK1A1P48729 337 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 RPL15P61313 204 aaKnown RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 EGR4Q05215 589 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 PMS2P3Q13401 168 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CASP8Q14790 479 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 DPY19L1Q2PZI1 675 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SLC36A2Q495M3 483 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TMEM155Q4W5P6 130 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 LIN52Q52LA3 116 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ESCO2Q56NI9 601 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 FIP1L1Q6UN15 594 aaKnown RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF836Q6ZNA1 936 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF621Q6ZSS3 439 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 LRRC28Q86X40 367 aaPredicted RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 VRK2Q86Y07 508 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF584Q8IVC4 421 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 C1orf174Q8IYL3 243 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 LRRC34Q8IZ02 419 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 MIER2Q8N344 545 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 PARP8Q8N3A8 854 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 CLIP4Q8N3C7 705 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SLC22A24Q8N4F4 322 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TMEM86BQ8N661 226 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ICA1LQ8NDH6 482 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ADPRHL1Q8NDY3 354 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 OR1J1Q8NGS3 322 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF417Q8TAU3 575 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 FAM110DQ8TAY7 271 aaPredicted RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 AGR3Q8TD06 166 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 MZB1Q8WU39 189 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TAAR8Q969N4 342 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ITFG2Q969R8 447 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SLC35B4Q969S0 331 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 TXNDC15Q96J42 360 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 FAM71F1Q96KD3 344 aaPredicted RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZIM3Q96PE6 472 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF587Q96SQ5 575 aaPredicted RBP4.37□□□□□ -1.71
SPG11-208ENST00000558155 PTDSS2Q9BVG9 487 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SPATA9Q9BWV2 254 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ASPNQ9BXN1 380 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SLC19A3Q9BZV2 496 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 KCNN2Q9H2S1 579 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms