RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCNB1P14635 433 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 IDO1P14902 403 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 ETS2P15036 469 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 ATF6P18850 670 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 GSTM3P21266 225 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 HTR2AP28223 471 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 GTF2H1P32780 548 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CCT3P49368 545 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 SERPINB9P50453 376 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PPT1P50897 306 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RAB9AP51151 201 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 NOVA1P51513 510 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 MLF1P58340 268 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RPL8P62917 257 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 CSNK1G2P78368 415 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 S100A12P80511 92 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CSTF1Q05048 431 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 EGFEM1PQ0D2K5 195 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PJVKQ0ZLH3 352 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CDH17Q12864 832 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 TFDP1Q14186 410 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 ZNF630Q2M218 657 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 CTSL3PQ5NE16 218 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MFSD14CQ5VZR4 134 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 KCNIP4Q6PIL6 250 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CBLN3Q6UW01 205 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 IL34Q6ZMJ4 242 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 LRRC74BQ6ZQY2 392 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RTL4Q6ZR62 310 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 DNM1P46Q6ZS02 220 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 HSD11B1LQ7Z5J1 315 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 SKA3Q8IX90 412 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MICU2Q8IYU8 434 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 TMEM123Q8N131 208 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CLEC4FQ8N1N0 589 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 GTPBP8Q8N3Z3 284 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 PQLC3Q8N755 202 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 ZNF433Q8N7K0 673 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 CCDC71LQ8N9Z2 235 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 TMEM104Q8NE00 496 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 FBXL13Q8NEE6 735 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 FAM83FQ8NEG4 500 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 PROKR2Q8NFJ6 384 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 OR2AP1Q8NGE2 309 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 OR5T3Q8NGG3 340 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 OR51L1Q8NGJ5 315 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 OR9A4Q8NGU2 314 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 DYDC1Q8WWB3 177 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 IL1F10Q8WWZ1 152 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RPL3LQ92901 407 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 CCDC127Q96BQ5 260 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 OTUB2Q96DC9 234 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 TMEM101Q96IK0 257 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RIT2Q99578 217 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 C7orf50Q9BRJ6 194 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 ANGPTL4Q9BY76 406 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 DERL2Q9GZP9 239 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 POLR3FQ9H1D9 316 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 OR51B6Q9H340 312 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 WDR55Q9H6Y2 383 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 ELOVL3Q9HB03 270 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 C12orf10Q9HB07 376 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CSNK1G1Q9HCP0 422 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 POLD4Q9HCU8 107 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 LYRM4Q9HD34 91 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 NANSQ9NR45 359 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PXMP2Q9NR77 195 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MRPL39Q9NYK5 338 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 SLC17A7Q9P2U7 560 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 NAGKQ9UJ70 344 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PITPNC1Q9UKF7 332 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PAIP2BQ9ULR5 123 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 FOXJ3Q9UPW0 622 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RASD1Q9Y272 281 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PIGLQ9Y2B2 252 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 WDR45Q9Y484 360 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 GMPPBQ9Y5P6 360 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 KPTNQ9Y664 436 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MYO10Q9HD67 2058 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 FRMPD4Q14CM0 1322 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MAP3K15Q6ZN16 1313 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CDHR2Q9BYE9 1310 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PLB1Q6P1J6 1458 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PLEKHG1Q9ULL1 1385 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 A0A0A6YYH2 397 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 ESYT2A0FGR8 921 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 FABP12A6NFH5 140 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 A6NJ64 397 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 SNTNA6NMZ2 147 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 USP27XA6NNY8 438 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 SERPINE3A8MV23 424 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 CENPBD1B2RD01 187 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 C9JVG2 144 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 PPIAL4DF5H284 164 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 SGK494L7N484 410 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 DLGAP1O14490 977 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 OR1F1O43749 312 aa2.13□□□□□ -2.07
SPG11-206ENST00000558093 TIMM8AO60220 97 aaPredicted RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 PSIP1O75475 530 aaKnown RBP2.13□□□□□ -2.07
SPG11-206ENST00000558093 BRI3O95415 125 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms