RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ZMIZ1Q9ULJ6 1067 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 FKBP7Q9Y680 259 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 A6NIZ1 184 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 NPIPB13A6NJU9 1138 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 NPIPB4C9JG80 1138 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 J3QLW9 94 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 PSMD9O00233 223 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 CXCL13O43927 109 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 OR2T7P0C7T2 308 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 PSKH1P11801 424 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ZNF19P17023 458 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 SDHBP21912 280 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 RAP1BP61224 184 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 RAP1AP62834 184 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ACTC1P68032 377 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ACTA1P68133 377 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 SRYQ05066 204 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 VASNQ6EMK4 673 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 TMPRSS11AQ6ZMR5 421 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 TRILQ7L0X0 811 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 OR2T27Q8NH04 317 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 OR10D3Q8NH80 312 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 CENPOQ9BU64 300 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 INPP5EQ9NRR6 644 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 KLHDC2Q9Y2U9 406 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 TRIM64BA6NI03 449 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 E9PI62 339 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 SMAD9O15198 467 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 EIF1BO60739 113 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ZNF239Q16600 458 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 MEP1BQ16820 701 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 TP53I3Q53FA7 332 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 C19orf48Q6RUI8 117 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 IGFL2Q6UWQ7 119 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 TMEM178AQ8NBL3 297 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ZNF775Q96BV0 537 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ZNF845Q96IR2 970 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ADGRG7Q96K78 797 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 SNX18Q96RF0 628 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 NDUFB11Q9NX14 153 aa18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 COA3Q9Y2R0 106 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-205ENST00000558036 ANKRD11Q6UB99 2663 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 PRR32B1ATL7 298 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 MPZL1O95297 269 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CPEP16870 476 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 PLXDC2Q6UX71 529 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 RPTNQ6XPR3 784 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 ESPNLQ6ZVH7 1005 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 DPY19L4Q7Z388 723 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 OR2V1Q8NHB1 315 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 SNIP1Q8TAD8 396 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 ROBO4Q8WZ75 1007 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 DEFB127Q9H1M4 99 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 LIPGQ9Y5X9 500 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 SIRT4Q9Y6E7 314 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 GPX5O75715 221 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CEACAM4O75871 244 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CELP19835 753 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CLDN17P56750 224 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 RAC3P60763 192 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 SLC16A9Q7RTY1 509 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 OR6N2Q8NGY6 317 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 NSMAFQ92636 917 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 TRMT61AQ96FX7 289 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 ZNF385AQ96PM9 386 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 MRPL13Q9BYD1 178 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CXorf56Q9H5V9 222 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 MRPL22Q9NWU5 206 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 BABAM2Q9NXR7 383 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 RASD1Q9Y272 281 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 GRIP1Q9Y3R0 1128 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 PCDHGB7Q9Y5F8 929 aa18.19■□□□□ 0.5
SNRPA1-205ENST00000558036 CDK2AP1O14519 115 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 PAX7P23759 505 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 LHX2P50458 406 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 AGFG1P52594 562 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 PLEKHG7Q6ZR37 379 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 SLC22A16Q86VW1 577 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 SNX33Q8WV41 574 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 UFD1Q92890 307 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 INTS14Q96SY0 518 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 TM9SF2Q99805 663 aa18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 NAA11Q9BSU3 229 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-205ENST00000558036 AKAP8O43823 692 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 MT-ND5P03915 603 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 PGA4P0DJD7 388 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 PGA3P0DJD8 388 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 RPS25P62851 125 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 HYAL4Q2M3T9 481 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 FAM205BPQ63HN1 556 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 CREB3L2Q70SY1 520 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 SLC25A44Q96H78 314 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 EXOSC4Q9NPD3 245 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 MSRB2Q9Y3D2 182 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 LOC102725191A0A1B0GVB3 256 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 SLC22A1O15245 554 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 CRABP1P29762 137 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 CRYBB2P43320 205 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 CLRN1P58418 232 aa18.17■□□□□ 0.5
SNRPA1-205ENST00000558036 TPBGQ13641 420 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms