RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 STARP49675 285 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 EGR3Q06889 387 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 FGL1Q08830 312 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 RAB11BQ15907 218 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 ODF4Q2M2E3 257 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 DEFB115Q30KQ5 88 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM17Q86X19 198 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 GABRG1Q8N1C3 465 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 BEST3Q8N1M1 668 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 CLRN3Q8NCR9 226 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 BAHD1Q8TBE0 780 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 TSEN15Q8WW01 171 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 EDAQ92838 391 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 DVL3Q92997 716 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 POTEKPQ9BYX7 375 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 LRIT1Q9P2V4 623 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM14AQ9Y6G1 99 aa10.73□□□□□ -0.69
VIPAS39-211ENST00000557658 LOC100289279A0A1B0GTE1 492 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM82A0PJX8 343 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 POM121BA6NF01 834 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 HSPB2A8KAH6 182 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 H3BSH0 61 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 RDH16O75452 317 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 PLATP00750 562 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TAS2R19P59542 299 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 DEFA5Q01523 94 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 GPR18Q14330 331 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 HSPB2Q16082 182 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF74Q16587 644 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 CLVS2Q5SYC1 327 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 NPSR1Q6W5P4 371 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 RNF44Q7L0R7 432 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF440Q8IYI8 595 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 LRRC75AQ8NAA5 344 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 OR5T2Q8NGG2 359 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 OR51A4Q8NGJ6 313 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 GPX8Q8TED1 209 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 FAM3DQ96BQ1 224 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 LRRC46Q96FV0 321 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 SPACA7Q96KW9 195 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ULBP3Q9BZM4 244 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TAS2R3Q9NYW6 316 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 GRHPRQ9UBQ7 328 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 DTX4Q9Y2E6 619 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 KANTRA0A1W2PQU2 76 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 PHYHO14832 338 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 PNMTP11086 282 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ALOX5APP20292 161 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 MST1P26927 711 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 PGDP52209 483 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 C2orf76Q3KRA6 126 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 STEAP2Q8NFT2 490 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 STK35Q8TDR2 534 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 NPAS1Q99742 590 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 CCDC3Q9BQI4 270 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC25A21Q9BQT8 299 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ATG5Q9H1Y0 275 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 OBP2AQ9NY56 170 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 CYB5R1Q9UHQ9 305 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 OR10H1Q9Y4A9 318 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 C2orf74A8MZ97 194 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 SULT1C2O00338 296 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 DCTN6O00399 190 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC17A2O00624 439 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ABCD4O14678 606 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 EIF4E2O60573 245 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 AKR7A3O95154 331 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 RASGRP1O95267 797 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 RAB3DO95716 219 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TXNDC12O95881 172 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ITGA5P08648 1049 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 HOXC4P09017 264 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ACHEP22303 614 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 CD96P40200 585 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 LSSP48449 732 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TOMM20Q15388 145 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 NNATQ16517 81 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 EMC4Q5J8M3 183 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ARHGAP40Q5TG30 622 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 WBP2NLQ6ICG8 309 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM205Q6UW68 189 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 PRSS35Q8N3Z0 413 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 OR4C3Q8NH37 302 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 MARC2Q969Z3 335 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 TSACCQ96A04 125 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 C4orf45Q96LM5 186 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 WDR92Q96MX6 357 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 IL23AQ9NPF7 189 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 STARD5Q9NSY2 213 aa10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 MRTO4Q9UKD2 239 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-211ENST00000557658 ARHGEF17Q96PE2 2063 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 H7C1C5 153 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms