RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SLC2A5P22732 501 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CXCR2P25025 360 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 AQP1P29972 269 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 LCN1P31025 176 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 EVI2BP34910 448 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 SLC1A1P43005 524 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 RGRP47804 291 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ARRB1P49407 418 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 KLK7P49862 253 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 SLC25A1P53007 311 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 GPX6P59796 221 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 SKP1P63208 163 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 LRRC63Q05C16 580 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 BCL2L1Q07817 233 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 DMC1Q14565 340 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 BCL2A1Q16548 175 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 RGS21Q2M5E4 152 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 PAGE2BQ5JRK9 111 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 KLF17Q5JT82 389 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 MARCH8Q5T0T0 291 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF772Q68DY9 489 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 TIGD3Q6B0B8 471 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 FAM173BQ6P4H8 233 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 TRIM40Q6P9F5 258 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 C2orf66Q6UXQ4 117 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF497Q6ZNH5 498 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 FRA10AC1Q70Z53 315 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 NDUFAF7Q7L592 441 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 GDPD3Q7L5L3 318 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF571Q7Z3V5 609 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 SNX20Q7Z614 316 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF546Q86UE3 836 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 C17orf82Q86X59 251 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 PLA2G4DQ86XP0 818 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 PLCZ1Q86YW0 608 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 PIANPQ8IYJ0 282 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CADM2Q8N3J6 435 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 EID2Q8N6I1 236 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 FBXL13Q8NEE6 735 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 OR5T3Q8NGG3 340 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 OR9G4Q8NGQ1 327 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 OR13C9Q8NGT0 318 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 OR2G2Q8NGZ5 317 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 OR5B3Q8NH48 314 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 GTSF1Q8WW33 167 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CAPSLQ8WWF8 208 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CHCHD10Q8WYQ3 142 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 NR4A3Q92570 626 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF689Q96CS4 500 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CERS2Q96G23 380 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF317Q96PQ6 595 aaPredicted RBP2.41□□□□□ -2.02
TRAV28-201ENST00000557548 SOSTQ9BQB4 213 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 TMEM246Q9BRR3 403 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 TMEM175Q9BSA9 504 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CENPHQ9H3R5 247 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ADAP2Q9NPF8 381 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 NRBP2Q9NSY0 501 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 FKBP14Q9NWM8 211 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 GPATCH2LQ9NWQ4 482 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 TREM2Q9NZC2 230 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF581Q9P0T4 197 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 DDX19BQ9UMR2 479 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 FLVCR1Q9Y5Y0 555 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 V9GY05 133 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 CDHR2Q9BYE9 1310 aa2.41□□□□□ -2.02
TRAV28-201ENST00000557548 NEURL4Q96JN8 1562 aa2.4□□□□□ -2.02
TRAV28-201ENST00000557548 ADCY9O60503 1353 aa2.4□□□□□ -2.02
TRAV28-201ENST00000557548 CNTNAP1P78357 1384 aa2.4□□□□□ -2.02
TRAV28-201ENST00000557548 TRBV9A0A0B4J1U6 114 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DL5BA0A0G2JN68 375 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DL5BA0A0G2JPC4 375 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 C1orf232A0A0U1RR37 186 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KBTBD11-OT1A0A1B0GTJ5 212 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 GSTTP1A0A1W2PQM5 241 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RAB19A4D1S5 217 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 A6NIZ1 184 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 TMEM210A6NLX4 147 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 E9PQ18 207 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 SIVA1O15304 175 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CLIC3O95833 236 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 TBX6O95947 436 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 IGHV2-5P01817 119 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 UBCP0CG48 685 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CCDC166P0CW27 439 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CCL2P13500 99 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 TCN1P20061 433 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 MSNP26038 577 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 GDF1P27539 372 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CD40LGP29965 261 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 NTSP30990 170 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 UGT1A3P35503 534 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RPL34P49207 117 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CX3CR1P49238 355 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 MRPL19P49406 292 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 SLC26A2P50443 739 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CRISP1P54107 249 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ARPC4P59998 168 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RAP1BP61224 184 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms