RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SERPINA5P05154 406 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 MAKP20794 623 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 LSP1P33241 339 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 NPTX1Q15818 432 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 AWAT1Q58HT5 328 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 SPRNQ5BIV9 151 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 REEP3Q6NUK4 255 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 LRFN4Q6PJG9 635 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 PXKQ7Z7A4 578 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 TSPYL5Q86VY4 417 aaPredicted RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 RBM45Q8IUH3 476 aaKnown RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 LRRC18Q8N456 261 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 ZDHHC22Q8N966 263 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 OR4K5Q8NGD3 323 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 OR4D11Q8NGI4 311 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 VANGL1Q8TAA9 524 aaPredicted RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 TAF15Q92804 592 aaKnown RBP eCLIP12□□□□□ -0.49
SLIRP-210ENST00000557431 DUX5Q96PT3 197 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 MCHR1Q99705 422 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF385DQ9H6B1 395 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 HINT3Q9NQE9 182 aaKnown RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF346Q9UL40 294 aaKnown RBP12□□□□□ -0.49
SLIRP-210ENST00000557431 PCDHGB1Q9Y5G3 927 aa12□□□□□ -0.49
SLIRP-210ENST00000557431 IGHV2-5P01817 119 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 OR8G3PP0DMU2 310 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 ARFIP2P53365 341 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 KLF3P57682 345 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-210ENST00000557431 SPATA46Q5T0L3 261 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 LRIF1Q5T3J3 769 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 REP15Q6BDI9 236 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 C1QL2Q7Z5L3 287 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 GPR32P1Q8NGA4 272 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 OR6S1Q8NH40 331 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 SNX33Q8WV41 574 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF347Q96SE7 839 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 EBF4Q9BQW3 602 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 DCAF16Q9NXF7 216 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 TAS2R5Q9NYW4 299 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
SLIRP-210ENST00000557431 MGAM2Q2M2H8 2515 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 IGLV3-9A0A075B6K5 115 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 IGHV1-69-2A0A0G2JMI3 117 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 DHHO43323 396 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 RNF13O43567 381 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 MFN2O95140 757 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 OR6A2O95222 327 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 LYPD3O95274 346 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 QDPRP09417 244 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 PGA4P0DJD7 388 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 PGA3P0DJD8 388 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 CCNOP22674 350 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 MPV17P39210 176 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 LCN2P80188 198 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 SELPLGQ14242 412 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 AGBL2Q5U5Z8 902 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 DCAF12L2Q5VW00 463 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 PIWIL3Q7Z3Z3 882 aaKnown RBP11.98□□□□□ -0.49
SLIRP-210ENST00000557431 KRT73Q86Y46 540 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 ARMC8Q8IUR7 673 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 OR6T1Q8NGN1 323 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF566Q969W8 418 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 SPDL1Q96EA4 605 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 TMEM43Q9BTV4 400 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 SPATA5L1Q9BVQ7 753 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 RBM4Q9BWF3 364 aaKnown RBP11.98□□□□□ -0.49
SLIRP-210ENST00000557431 UBAP1Q9NZ09 502 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-210ENST00000557431 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 USH1CQ9Y6N9 552 aa11.98□□□□□ -0.49
SLIRP-210ENST00000557431 TRBV5-3A0A0A0MS03 114 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 A0A0X1KG70 313 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 ISPDA4D126 451 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 SPRY3O43610 288 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 UMPSP11172 480 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF250P15622 560 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 CRYBB2P43320 205 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 RAD52P43351 418 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 STX1BP61266 288 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
SLIRP-210ENST00000557431 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
SLIRP-210ENST00000557431 ZP4Q12836 540 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 ZNF74Q16587 644 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 DUSP7Q16829 419 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 TMEM53Q6P2H8 277 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 EPGNQ6UW88 154 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 SLC16A14Q7RTX9 510 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-210ENST00000557431 SNX32Q86XE0 403 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
SLIRP-210ENST00000557431 SYT14Q8NB59 555 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms