RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MRPL38Q96DV4 380 aaKnown RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 FABP7O15540 132 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF93P35789 620 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TUSC1Q2TAM9 212 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 AKR7LQ8NHP1 331 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ASH2LQ9UBL3 628 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 RIPK3Q9Y572 518 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CD99P14209 185 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GJA4P35212 333 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 IDUAP35475 653 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ERVFC1-1P60608 527 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TNFRSF17Q02223 184 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 NHLH1Q02575 133 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 NHLH2Q02577 135 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ZDHHC24Q6UX98 284 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 VCX2Q9H322 139 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GABRR3A8MPY1 467 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CDC123O75794 336 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CD46P15529 392 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 WASP42768 502 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ARFGEF2Q9Y6D5 1785 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 BSGP35613 385 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 AGTR2P50052 363 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 SUSD1Q6UWL2 747 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ABI3BPQ7Z7G0 1075 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 SDR9C7Q8NEX9 313 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 OR14A16Q8NHC5 309 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF583Q96ND8 569 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 PADI1Q9ULC6 663 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GABRQQ9UN88 632 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TNS2Q63HR2 1409 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 A0A1B0GV72 72 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GPR31O00270 319 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 SDHDO14521 159 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ANKRD34CP0C6C1 535 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ARG2P78540 354 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GAB1Q13480 694 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 NAT6Q93015 286 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GPR55Q9Y2T6 319 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 DIP2BQ9P265 1576 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 PRAMEF4O60810 478 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 GABREP78334 506 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 ESAMQ96AP7 390 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 LINC00597Q9H2U6 94 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TNFSF8P32971 234 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 EPHA5P54756 1037 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 PPP1CAP62136 330 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TIMM8AO60220 97 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 KLF8O95600 359 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 NRLP54845 237 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 RPUSD3Q6P087 351 aaKnown RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 NETO2Q8NC67 525 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 RHOFQ9HBH0 211 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TCRBP04435 133 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 DIO3P55073 304 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 SIRPAP78324 504 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CXCL9Q07325 125 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 VN1R3Q9BXE9 311 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 OSGIN1Q9UJX0 560 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 HS3ST4Q9Y661 456 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 MED12Q93074 2177 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 OR7C2O60412 319 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 PPOXP50336 477 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 LYSMD4Q5XG99 296 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TOMM20LQ6UXN7 152 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 MAML2Q8IZL2 1156 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CARFQ8N187 725 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 CFAP20Q9Y6A4 193 aaKnown RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 DEGS1O15121 323 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NME2P22392 152 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 GDI1P31150 447 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 AKR1C3P42330 323 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FPGSQ05932 587 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ASAH1Q13510 395 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 PLA1AQ53H76 456 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 OVCH1Q7RTY7 1134 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ZFP41Q8N8Y5 198 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ZP3P21754 424 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FECHP22830 423 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 CCR9P51686 369 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 RPS24P62847 133 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 OR8B8Q15620 311 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 PGGHGQ32M88 737 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NXNL2Q5VZ03 156 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ZMYND19Q96E35 227 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 MYBPHLA2RUH7 354 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 IL5P05113 134 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FUT1P19526 365 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms