RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KRT6CP48668 564 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 RPS23P62266 143 aaKnown RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TUBA1BP68363 451 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF763Q0D2J5 394 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 SKP2Q13309 424 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MAD2L1BPQ15013 274 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PPP1R7Q15435 360 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MOGQ16653 247 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 DEFB121Q5J5C9 76 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PLAC9Q5JTB6 97 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CCNJQ5T5M9 372 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 GKAP1Q5VSY0 366 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 KLC3Q6P597 504 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM154Q6P9G4 183 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 LRRN1Q6UXK5 716 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF782Q6ZMW2 699 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CREB3L2Q70SY1 520 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TUBA1AQ71U36 451 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF551Q7Z340 670 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MDP1Q86V88 176 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZBED8Q8IZ13 594 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CENPLQ8N0S6 344 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PARP8Q8N3A8 854 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 COX18Q8N8Q8 333 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 OR9K2Q8NGE7 335 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 FAM76AQ8TAV0 307 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 SSMEM1Q8WWF3 244 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CCL17Q92583 94 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CDKL2Q92772 493 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PHF21BQ96EK2 531 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 SLC47A1Q96FL8 570 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 APIPQ96GX9 242 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF75AQ96N20 296 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MS4A4EQ96PG1 132 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF385AQ96PM9 386 aaKnown RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 BAG1Q99933 345 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PIGUQ9H490 435 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CTPS2Q9NRF8 586 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 DECR2Q9NUI1 292 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 SLCO1C1Q9NYB5 712 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 VSX1Q9NZR4 365 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TAAR3PQ9P1P4 343 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MYEF2Q9P2K5 600 aaKnown RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 NKX1-2Q9UD57 310 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF225Q9UK10 706 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PCTPQ9UKL6 214 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TMCO1Q9UM00 188 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 HYDINQ4G0P3 5121 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 A0A096LPK6 155 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 FAM159BA6NKW6 160 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 A8MXK9 166 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 K7EIL1 84 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF208O43345 1280 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 SLC43A1O75387 559 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 UPK3AO75631 287 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 TSPAN9O75954 239 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 RSL1D1O76021 490 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF432O94892 652 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 VAMP5O95183 116 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 HNRNPCP07910 306 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 RBP1P09455 135 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 UBL4AP11441 157 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 BCKDHAP12694 445 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF14P17017 642 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 RHCEP18577 417 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 HSD17B3P37058 310 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 FRKP42685 505 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 HTR3AP46098 478 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ARF1P84077 181 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 GALK2Q01415 458 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ROR2Q01974 943 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 GUCY2DQ02846 1103 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PAX2Q02962 417 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 EMX1Q04741 257 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 NPRL3Q12980 569 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PDIA2Q13087 525 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF141Q15928 474 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 TRMT5Q32P41 509 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 NDUFAF6Q330K2 333 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 KLHL22Q53GT1 634 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM225Q6GV28 225 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 CDC73Q6P1J9 531 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 C6orf89Q6UWU4 347 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 C3orf62Q6ZUJ4 267 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 EIF3MQ7L2H7 374 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 GRINAQ7Z429 371 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 CMC1Q7Z7K0 106 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 LRRC28Q86X40 367 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM139Q8IV31 216 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PTGR2Q8N8N7 351 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 FBXO36Q8NEA4 188 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 WFDC9Q8NEX5 89 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 OR10S1Q8NGN2 331 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 RFWD2Q8NHY2 731 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms