RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 OR5M9Q8NGP3 310 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 TSEN15Q8WW01 171 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 MRPS24Q96EL2 167 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 BMFQ96LC9 184 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 RPP25Q9BUL9 199 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 MRI1Q9BV20 369 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 POFUT1Q9H488 388 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CERS4Q9HA82 394 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 MYEF2Q9P2K5 600 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 GON4LQ3T8J9 2241 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 A6NCN8 305 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 D6RAR5 112 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 K7EQS6 105 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 PLATP00750 562 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 CD14P08571 375 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 CSF1P09603 554 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 AKAIN1P0CW23 69 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 GDI1P31150 447 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 CCKBRP32239 447 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 MNDAP41218 407 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 GRM7Q14831 915 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 CD226Q15762 336 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ZNF74Q16587 644 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ITPRIPL2Q3MIP1 535 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 MESTQ5EB52 335 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ZNF542PQ5EBM4 170 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 TMEM196Q5HYL7 178 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 POMZP3Q6PJE2 187 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 LRFN4Q6PJG9 635 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 SLC35D2Q76EJ3 337 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 NAXDQ8IW45 347 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 BOLLQ8N9W6 283 aaKnown RBP10.33□□□□□ -0.76
SRP54-213ENST00000556994 PLPP7Q8NBV4 271 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 OR6N1Q8NGY5 312 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 C15orf40Q8WUR7 153 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
SRP54-213ENST00000556994 WDR92Q96MX6 357 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 PBX4Q9BYU1 374 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 COMMD4Q9H0A8 199 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ATG5Q9H1Y0 275 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 SYT4Q9H2B2 425 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 LDAHQ9H6V9 325 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 EVA1AQ9H8M9 152 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ZMAT3Q9HA38 289 aaKnown RBP10.33□□□□□ -0.76
SRP54-213ENST00000556994 APMAPQ9HDC9 416 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 Q9N2J8 555 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 GRHPRQ9UBQ7 328 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ERVK-19Q9WJR5 959 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 EFCAB7A8K855 629 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 M0QYG6 137 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 DOK2O60496 412 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 HPP00738 406 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 COL9A1P20849 921 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 MST1P26927 711 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 MPGP29372 298 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 SDHAP31040 664 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 PRSS3P35030 304 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 KIR2DL1P43626 348 aaPredicted RBP10.33□□□□□ -0.76
SRP54-213ENST00000556994 KIR3DL2P43630 455 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 TPMTP51580 245 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 GMFBP60983 142 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 HTRA3P83110 453 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 DMWDQ09019 674 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 NFATC4Q14934 902 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 UBXN2BQ14CS0 331 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 BEX5Q5H9J7 111 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ARHGAP40Q5TG30 622 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 STEAP1BQ6NZ63 245 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 C16orf52Q8NHV5 167 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 GPR148Q8TDV2 347 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 LPAR4Q99677 370 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 KCNG2Q9UJ96 466 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 FBXO4Q9UKT5 387 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 SLC22A13Q9Y226 551 aa10.33□□□□□ -0.76
SRP54-213ENST00000556994 TRBV5-7A0A0A0MS05 114 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 TRAV14DV4A0A0A6YYC5 116 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 C2orf74A8MZ97 194 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ZNF254O75437 659 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 APBB3O95704 486 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 LIPCP11150 499 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 MAOAP21397 527 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 CENPAP49450 140 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 DEFA5Q01523 94 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 EGR4Q05215 589 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ETFDHQ16134 617 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 LRRC37A5PQ49AS3 106 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 WDR38Q5JTN6 314 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 TMEM205Q6UW68 189 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 PARGQ86W56 976 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ZNF595Q8IYB9 648 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 SDR16C5Q8N3Y7 309 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 METTL27Q8N6F8 245 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 LRRC75AQ8NAA5 344 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 PHOSPHO1Q8TCT1 267 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 BADQ92934 168 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms