RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 A0A096LNT2 108 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 hCG_2039718K7EN88 272 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 OR7A10O76100 309 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 IGF2P01344 180 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 FABP3P05413 133 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 TSPAN19P0C672 248 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 RAP2AP10114 183 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 FCGR1AP12314 374 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-224ENST00000556737 ANPEPP15144 967 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 IFNGR1P15260 489 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 FABP6P51161 128 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 BIDP55957 195 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.97
SHMT2-224ENST00000556737 CAMK2DQ13557 499 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 MELKQ14680 651 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 MST1LQ2TV78 715 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 IFI44LQ53G44 452 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 NANOGNBQ7Z5D8 188 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 MDP1Q86V88 176 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 FBXL14Q8N1E6 418 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 LRTOMTQ8WZ04 291 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 HTRA1Q92743 480 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 PRRC1Q96M27 445 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF75AQ96N20 296 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 CHID1Q9BWS9 393 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 ULBP2Q9BZM5 246 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 MOV10Q9HCE1 1003 aaKnown RBP8.97□□□□□ -0.97
SHMT2-224ENST00000556737 NANSQ9NR45 359 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 MAN2C1Q9NTJ4 1040 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 C20orf141Q9NUB4 165 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 B3GNT2Q9NY97 397 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 RIMS3Q9UJD0 308 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 A4GNTQ9UNA3 340 aa8.97□□□□□ -0.97
SHMT2-224ENST00000556737 IGHV2OR16-5A0A0B4J2B6 119 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 FAM171A2A8MVW0 826 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PIP5K1CO60331 668 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PRSS23O95084 383 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 HLA-HP01893 362 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PGA4P0DJD7 388 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PGA3P0DJD8 388 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 THRBP10828 461 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 B4GALT1P15291 398 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 CBR1P16152 277 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 AHCYP23526 432 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PAX7P23759 505 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 FASP25445 335 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 APOBEC3AP31941 199 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 CSNK1A1P48729 337 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 IDH3GP51553 393 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 TAS2R41P59536 307 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 SELENOWP63302 87 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 HGFACQ04756 655 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 SLC34A1Q06495 639 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 RPL18Q07020 188 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 SLC35D2Q76EJ3 337 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 TSEN54Q7Z6J9 526 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 AMIGO2Q86SJ2 522 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 ZDHHC21Q8IVQ6 265 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 DEPDC4Q8N2C3 294 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 PQLC1Q8N2U9 271 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 ICA1LQ8NDH6 482 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 OR6X1Q8NH79 312 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 TMEM239Q8WW34 195 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 LIPHQ8WWY8 451 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 GEMIN6Q8WXD5 167 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 ADAD1Q96M93 576 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 HS6ST2Q96MM7 605 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 FOXB1Q99853 325 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 SEMA6AQ9H2E6 1030 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 MAGIXQ9H6Y5 334 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 BARX1Q9HBU1 254 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 CA10Q9NS85 328 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 STX18Q9P2W9 335 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 NKX1-2Q9UD57 310 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 FAM32AQ9Y421 112 aaKnown RBP8.96□□□□□ -0.98
SHMT2-224ENST00000556737 TLN2Q9Y4G6 2542 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 ARFGEF3Q5TH69 2177 aa8.96□□□□□ -0.98
SHMT2-224ENST00000556737 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
SHMT2-224ENST00000556737 ALPK2Q86TB3 2170 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 IGHV4-30-2A0A087WSY4 118 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 ZNF726A6NNF4 738 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 RNF223E7ERA6 249 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 H3BNX3 289 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 J3KTA2 159 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 FFAR1O14842 300 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 RNF13O43567 381 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 DEAF1O75398 565 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-224ENST00000556737 E2F6O75461 281 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 CST1P01037 141 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 CRYAAP02489 173 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 IFNW1P05000 195 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 ZNF14P17017 642 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-224ENST00000556737 HOXB6P17509 224 aaKnown RBP8.95□□□□□ -0.98
SHMT2-224ENST00000556737 FUT1P19526 365 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 ARR3P36575 388 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 RUNX1T1Q06455 604 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 NPRL3Q12980 569 aa8.95□□□□□ -0.98
SHMT2-224ENST00000556737 TRIP10Q15642 601 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms