RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MT-ND5P03915 603 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 FAM157BP0CG42 384 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PRTN3P24158 256 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 CSNK1A1P48729 337 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 IDH3AP50213 366 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PUDPQ08623 228 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PMS2P3Q13401 168 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 HFEQ30201 348 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 ALG10BQ5I7T1 473 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 FAM91A1Q658Y4 838 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 ULK3Q6PHR2 472 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PXKQ7Z7A4 578 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 SLC22A24Q8N4F4 322 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 SLC30A7Q8NEW0 376 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 BBS10Q8TAM1 723 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 ZNF519Q8TB69 540 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 C22orf15Q8WYQ4 148 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 DVL3Q92997 716 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-221ENST00000556571 SLC47A1Q96FL8 570 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 C1orf198Q9H425 327 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 ZMAT3Q9HA38 289 aaKnown RBP10.12□□□□□ -0.79
ACTN1-221ENST00000556571 MED4Q9NPJ6 270 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 SDR39U1Q9NRG7 319 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-221ENST00000556571 MRPL39Q9NYK5 338 aaKnown RBP10.12□□□□□ -0.79
ACTN1-221ENST00000556571 SELENONQ9NZV5 590 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 ZIM2Q9NZV7 527 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
ACTN1-221ENST00000556571 PPIAL4EA0A075B759 164 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 PPIAL4CA0A0B4J2A2 164 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 PPIAL4DF5H284 164 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 TPD52L2O43399 206 aaKnown RBP10.11□□□□□ -0.79
ACTN1-221ENST00000556571 BGLAPP02818 100 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 LCKP06239 509 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 OR8G3PP0DMU2 310 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 PPIAL4FP0DN26 164 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 ARAFP10398 606 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 AHCYP23526 432 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 HTR2AP28223 471 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 PRKAR1BP31321 381 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 POLR2JP52435 117 aaKnown RBP10.11□□□□□ -0.79
ACTN1-221ENST00000556571 RBBP4Q09028 425 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 C6orf10Q5SRN2 563 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 USP51Q70EK9 711 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 DPPA2Q7Z7J5 298 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 WDFY1Q8IWB7 410 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 SIGLECL1Q8N7X8 197 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 OR1J2Q8NGS2 313 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 FGFBP3Q8TAT2 258 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 LRRC58Q96CX6 371 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 ITCHQ96J02 903 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 TSPAN32Q96QS1 320 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 GPA33Q99795 319 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 GAL3ST1Q99999 423 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 BCL2L14Q9BZR8 327 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 LRMDAQ9H2I8 198 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 SAP30LQ9HAJ7 183 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 A4GALTQ9NPC4 353 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 TRIM33Q9UPN9 1127 aa10.11□□□□□ -0.79
ACTN1-221ENST00000556571 A0A0G2JK05 382 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 C5orf58C9J3I9 102 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 PLPP3O14495 311 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 FARS2O95363 451 aaKnown RBP10.1□□□□□ -0.79
ACTN1-221ENST00000556571 SNAP29O95721 258 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 PTHP01270 115 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 NUDT7P0C024 238 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 TROVE2P10155 538 aaKnown RBP eCLIP10.1□□□□□ -0.79
ACTN1-221ENST00000556571 ETS2P15036 469 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 DRD4P21917 467 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 UCP2P55851 309 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 RGNQ15493 299 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 TUSC1Q2TAM9 212 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 GTDC1Q4AE62 458 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 FAM209AQ5JX71 171 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 TMEM53Q6P2H8 277 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 MSANTD1Q6ZTZ1 278 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 DOK3Q7L591 496 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 PAQR4Q8N4S7 273 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-221ENST00000556571 C10orf53Q8N6V4 93 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 TMEM54Q969K7 222 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 MAL2Q969L2 176 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 VPS33AQ96AX1 596 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 ELMOD3Q96FG2 381 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 MOGAT1Q96PD6 335 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 SIKE1Q9BRV8 207 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 OR51B6Q9H340 312 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 RAD21L1Q9H4I0 556 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 RABEP2Q9H5N1 569 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 RNF121Q9H920 327 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 UNKLQ9H9P5 680 aaKnown RBP10.1□□□□□ -0.79
ACTN1-221ENST00000556571 TMEM27Q9HBJ8 222 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 NPHS2Q9NP85 383 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 GLTPQ9NZD2 209 aa10.1□□□□□ -0.79
ACTN1-221ENST00000556571 A0A0G2JND7 137 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 ATP8B1O43520 1251 aa10.09□□□□□ -0.79
ACTN1-221ENST00000556571 EDF1O60869 148 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms