RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 GCNT4Q9P109 453 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 STOX2Q9P2F5 926 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TBX21Q9UL17 535 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 IGLV3-22A0A075B6J6 115 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 NSG1A0A0A6YYJ2 146 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 LOC110117498-PIK3R3F6TDL0 507 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 H0YC42 278 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 LAD1O00515 517 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 OR2F2O95006 317 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 TSPAN13O95857 204 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 STAG3L3P0CL85 134 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 ARRB1P49407 418 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 ACLYP53396 1101 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 C21orf59P57076 290 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 IRX3P78415 501 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 IL18Q14116 193 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 LRRC10Q5BKY1 277 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 TMEM255AQ5JRV8 349 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 LY6G6FQ5SQ64 297 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 GPR157Q5UAW9 335 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 Q6ZN92 141 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 CEP112Q8N8E3 955 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 DUSP18Q8NEJ0 188 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 BPIFCQ8NFQ6 507 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 SLC22A8Q8TCC7 542 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 TSEN15Q8WW01 171 aaKnown RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 NRGNQ92686 78 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 SLC38A4Q969I6 547 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 IFT74Q96LB3 600 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 BCL7BQ9BQE9 202 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 HDHD3Q9BSH5 251 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 ILKAPQ9H0C8 392 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 RACGAP1Q9H0H5 632 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 AUNIPQ9H7T9 357 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 SIAEQ9HAT2 523 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 NTN4Q9HB63 628 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 RPRD1BQ9NQG5 326 aaKnown RBP2.65□□□□□ -1.99
SCFD1-221ENST00000556534 NECAP2Q9NVZ3 263 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 SLC25A37Q9NYZ2 338 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 GNPTGQ9UJJ9 305 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 PITPNC1Q9UKF7 332 aa2.65□□□□□ -1.99
SCFD1-221ENST00000556534 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 TRBV11-1A0A0K0K1C0 115 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 LRCOL1A6NCL2 159 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 RBMY1BA6NDE4 496 aaKnown RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 RBMY1EA6NEQ0 496 aaKnown RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 CCDC182A6NF36 153 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 L7N2F9 121 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 EIF3HO15372 352 aaKnown RBP eCLIP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 CLOCKO15516 846 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 AKR7A2O43488 359 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PSTPIP1O43586 416 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 TOM1O60784 492 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 H6PDO95479 791 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 KLK3P07288 261 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 RBMY1DP0C7P1 496 aaKnown RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 RBMY1A1P0DJD3 496 aaKnown RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 IL12AP29459 219 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 HOXA9P31269 272 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 OTX1P32242 354 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 RPS5P46782 204 aaKnown RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 TFPI2P48307 235 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 KRTAP10-1P60331 282 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 SPAG1Q07617 926 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 MERTKQ12866 999 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 ILKQ13418 452 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 GNMTQ14749 295 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 CYTH1Q15438 398 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 CHRNA6Q15825 494 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 CAVIN4Q5BKX8 364 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 OR52W1Q6IF63 320 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 HSDL2Q6YN16 418 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 LRRC74BQ6ZQY2 392 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 C6orf120Q7Z4R8 191 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 TMCO2Q7Z6W1 182 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 SCD5Q86SK9 330 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 LUZP2Q86TE4 346 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 C12orf56Q8IXR9 622 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 SAXO1Q8IYX7 474 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 MS4A15Q8N5U1 240 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 B3GNT7Q8NFL0 401 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 GIMAP1Q8WWP7 306 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 KIFAP3Q92845 792 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 MS4A4EQ96PG1 132 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 C20orf24Q9BUV8 137 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 LY9Q9HBG7 655 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PTTG3PQ9NZH4 202 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PDP1Q9P0J1 537 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 TMCO1Q9UM00 188 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PACSIN2Q9UNF0 486 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PDS5BQ9NTI5 1447 aa2.64□□□□□ -1.99
SCFD1-221ENST00000556534 PLEKHG2Q9H7P9 1386 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TRAV25A0A0B4J276 109 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 A0A1B0GTQ1 180 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 C12orf77C9JDV5 145 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 C11orf94C9JXX5 98 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TEX46H3BTG2 121 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms