RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 FRMD1Q8N878 549 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR4C16Q8NGL9 310 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR51Q1Q8NH59 317 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 B3GALT1Q9Y5Z6 326 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 PYCARD-AS1I3L0S3 204 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 SUSD5O60279 629 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF43P17038 809 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZP3P21754 424 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PEA15Q15121 130 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 SMAD2Q15796 467 aaKnown RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 EEF1A1P5Q5VTE0 462 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 RHOUQ7L0Q8 258 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ABI3BPQ7Z7G0 1075 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR5M1Q8NGP8 315 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR1E3Q8WZA6 343 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM3CQ92520 227 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PFDN5Q99471 154 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 STK17BO94768 372 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 EMDP50402 254 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF84P51523 738 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 C19orf57Q0VDD7 668 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 MELKQ14680 651 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM69BQ5VUD6 431 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 FCRL6Q6DN72 434 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 C19orf47Q8N9M1 422 aaKnown RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR10R2Q8NGX6 335 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PELI1Q96FA3 418 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR1F2PQ96R84 312 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 NRTNQ99748 197 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 GPA33Q99795 319 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF649Q9BS31 505 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 EHFQ9NZC4 300 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 TRAV36DV7A0A075B6V5 113 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PRAMEF26H0Y7S4 382 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 P2RY10O00398 339 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 WDPCPO95876 746 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PPA1Q15181 289 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAB30Q15771 203 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMPRSS11FQ6ZWK6 438 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM71CQ8NEG0 241 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 MRGPRX3Q96LB0 322 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PLEKHJ1Q9NW61 149 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 RGPD3A6NKT7 1758 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 RGPD4Q7Z3J3 1758 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 CTNSO60931 367 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 NAGAP17050 411 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM74A1Q5RGS3 127 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF770Q6IQ21 691 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 LINC00346Q8IVM7 164 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ST8SIA2Q92186 375 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 SULT4A1Q9BR01 284 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 PPP1R3EQ9H7J1 279 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 ADGRL4Q9HBW9 690 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 DKKL1Q9UK85 242 aa13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 UBE2J1Q9Y385 318 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-207ENST00000556399 BRINP1O60477 761 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR2F2O95006 317 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR2F1Q13607 317 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM122BQ7Z309 247 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 RASGRP3Q8IV61 690 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR11H7Q8NGC8 314 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SYT3Q9BQG1 590 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 A0A087WV62 115 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR5H14A6NHG9 310 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 CXCL10P02778 98 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 CA3P07451 260 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 CCNOP22674 350 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SDHAP31040 664 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZP2Q05996 745 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SNTB1Q13884 538 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 DOC2BQ14184 412 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SGCBQ16585 318 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 PGAP1Q75T13 922 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 GRAMD2AQ8IUY3 354 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SULF2Q8IWU5 870 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF442Q9H7R0 627 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC7A11Q9UPY5 501 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 F5H5K5 113 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF250P15622 560 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 PPT1P50897 306 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 PMPCAQ10713 525 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 DEFB126Q9BYW3 111 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms