RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 HSPB2A8KAH6 182 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 M0R129 80 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 RGS10O43665 173 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 HLA-DQA2P01906 255 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 RPSAP08865 295 aaKnown RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 QDPRP09417 244 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 PGA4P0DJD7 388 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 PGA3P0DJD8 388 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 PIPP12273 146 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF823P16415 610 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 SPI1P17947 270 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MYL12AP19105 171 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 NPR2P20594 1047 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 CRHBPP24387 322 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 DCKP27707 260 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 GSTT1P30711 240 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 HSPB2Q16082 182 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 KCTD21Q4G0X4 260 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 UGT2A3Q6UWM9 527 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 FGD2Q7Z6J4 655 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZBTB46Q86UZ6 589 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 GLB1L2Q8IW92 636 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 UBE2J2Q8N2K1 259 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZIC4Q8N9L1 334 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 SYT14Q8NB59 555 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 OR9Q1Q8NGQ5 310 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 OR6K6Q8NGW6 343 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 APH1BQ8WW43 257 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 TMEM54Q969K7 222 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MCHR2Q969V1 340 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 TMEM80Q96HE8 168 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 OR2M2Q96R28 347 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 DDOQ99489 341 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MNTQ99583 582 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 CDADC1Q9BWV3 514 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MRPL13Q9BYD1 178 aaKnown RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 NMNAT2Q9BZQ4 307 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 NUAK2Q9H093 628 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 KCNN2Q9H2S1 579 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 SLCO5A1Q9H2Y9 848 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF696Q9H7X3 374 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MED20Q9H944 212 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MRPS18AQ9NVS2 196 aaKnown RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 PSORS1C1Q9UIG5 152 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 SCOCQ9UIL1 159 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF835Q9Y2P0 537 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 DSPP15924 2871 aaKnown RBP8.18□□□□□ -1.1
ACTN1-218ENST00000556343 DNAJC13O75165 2243 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 FREM3P0C091 2139 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF407Q9C0G0 2248 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 EIF4E1BA6NMX2 242 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF587BE7ETH6 402 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 H7C1C5 153 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 PHYHO14832 338 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 DHHO43323 396 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF432O94892 652 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 CNOT4O95628 575 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 RAB36O95755 333 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 TMIGD3P0DMS9 266 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 DBTP11182 482 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 KLK2P20151 261 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 CTSSP25774 331 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 LAP3P28838 519 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 OPRM1P35372 400 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 SELENOPP49908 381 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 LCN6P62502 163 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ACTC1P68032 377 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ACTA1P68133 377 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF91Q05481 1191 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 SHFQ7M4L6 423 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 ATCAYQ86WG3 371 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 DOLPP1Q86YN1 238 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 TMEM123Q8N131 208 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 OR6V1Q8N148 313 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 TSPAN14Q8NG11 270 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 OR6K3Q8NGY3 331 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 NSMAFQ92636 917 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 GGHQ92820 318 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 CNN2Q99439 309 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 RBM24Q9BX46 236 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 CCDC90BQ9GZT6 254 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 SEC61A2Q9H9S3 476 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 AMBNQ9NP70 447 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 INPP5EQ9NRR6 644 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 KCNG2Q9UJ96 466 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 CLEC4AQ9UMR7 237 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 EXOGQ9Y2C4 368 aaKnown RBP8.17□□□□□ -1.1
ACTN1-218ENST00000556343 TMEM14AQ9Y6G1 99 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 MPDZO75970 2070 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms