RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ROR2Q01974 943 aaKnown RBP6.74□□□□□ -1.33
TDP1-214ENST00000556063 SLC34A1Q06495 639 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 GINS1Q14691 196 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 STK11Q15831 433 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 PGGHGQ32M88 737 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 SFRP5Q5T4F7 317 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 OR7E24Q6IFN5 339 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 KLHL24Q6TFL4 600 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.74□□□□□ -1.33
TDP1-214ENST00000556063 FAM122BQ7Z309 247 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 P2RY8Q86VZ1 359 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 GABRG1Q8N1C3 465 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 SYT14Q8NB59 555 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 C1orf162Q8NEQ5 155 aaPredicted RBP6.74□□□□□ -1.33
TDP1-214ENST00000556063 ZNF519Q8TB69 540 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 TMEM54Q969K7 222 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 RDH12Q96NR8 316 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 ALKBH3Q96Q83 286 aaPredicted RBP6.74□□□□□ -1.33
TDP1-214ENST00000556063 TSPAN32Q96QS1 320 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 SNX18Q96RF0 628 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 KCNK17Q96T54 332 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 MRPL13Q9BYD1 178 aaKnown RBP6.74□□□□□ -1.33
TDP1-214ENST00000556063 OR10A4Q9H209 315 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 SLC25A19Q9HC21 320 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 CRLF2Q9HC73 371 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 GALNT8Q9NY28 637 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 PLA2G2EQ9NZK7 142 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 NDRG3Q9UGV2 375 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 ADAM18Q9Y3Q7 739 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 ABCA4P78363 2273 aa6.74□□□□□ -1.33
TDP1-214ENST00000556063 HEATR1Q9H583 2144 aaKnown RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 HCFC1P51610 2035 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 SLC22A23A1A5C7 686 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 PRSS37A4D1T9 235 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 PRSS44E7EML9 344 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 BHLHE40O14503 412 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 CASQ2O14958 399 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 DHHO43323 396 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 KHDRBS3O75525 346 aaKnown RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 FARS2O95363 451 aaKnown RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 QDPRP09417 244 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 COX5AP20674 150 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 IGHV1-2P23083 117 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 SRSF1Q07955 248 aaKnown RBP eCLIP6.73□□□□□ -1.33
TDP1-214ENST00000556063 NPRL3Q12980 569 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 LRRC36Q1X8D7 754 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 CEACAM16Q2WEN9 425 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 MESTQ5EB52 335 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 SLC35F1Q5T1Q4 408 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 LEG1Q6P5S2 330 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 ANKRD16Q6P6B7 361 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 BHLHA15Q7RTS1 189 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 DPPA2Q7Z7J5 298 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 CXorf67Q86X51 503 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 CCDC36Q8IYA8 594 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 C17orf78Q8N4C9 275 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 ZNF433Q8N7K0 673 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 ZNF555Q8NEP9 628 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 OR52E2Q8NGJ4 325 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 OR8D4Q8NGM9 314 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 OR2T4Q8NH00 348 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 OR4K13Q8NH42 304 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 HDAC2Q92769 488 aaKnown RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 MCHR2Q969V1 340 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 RASD2Q96D21 266 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 MUCL1Q96DR8 90 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 GABARAPL3Q9BY60 117 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 PLA2G12AQ9BZM1 189 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 SYT4Q9H2B2 425 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 KCNN2Q9H2S1 579 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 RIBC2Q9H4K1 309 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 GPR35Q9HC97 309 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 NGBQ9NPG2 151 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 OBP2BQ9NPH6 170 aa6.73□□□□□ -1.33
TDP1-214ENST00000556063 SMPD3Q9NY59 655 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 TMEFF2Q9UIK5 374 aaPredicted RBP6.73□□□□□ -1.33
TDP1-214ENST00000556063 PRR14LQ5THK1 2151 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 TUBAL3A6NHL2 446 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 ZNF99A8MXY4 864 aaPredicted RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 CASKO14936 926 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 SLC16A7O60669 478 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 MITFO75030 526 aaPredicted RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 RAD51DO75771 328 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 LYZL6O75951 148 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 TP53P04637 393 aaPredicted RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 IGFBP1P08833 259 aaPredicted RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 HIST1H1CP16403 213 aaKnown RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 NPR2P20594 1047 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 EDNRAP25101 427 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 PEX2P28328 305 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 UGT2B10P36537 528 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 CDKN2AP42771 156 aaKnown RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 CENPAP49450 140 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 ZNF133P52736 654 aaPredicted RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 BLVRAP53004 296 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 CDC42P60953 191 aa6.72□□□□□ -1.33
TDP1-214ENST00000556063 UBE2NP61088 152 aaKnown RBP6.72□□□□□ -1.33
TDP1-214ENST00000556063 ARF1P84077 181 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms