RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 C3orf36Q3SXR2 165 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 ZBED5Q49AG3 693 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 AGAP6Q5VW22 663 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 LCN8Q6JVE9 175 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 NHLRC1Q6VVB1 395 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 SPNS3Q6ZMD2 512 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 TMPRSS11FQ6ZWK6 438 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 PIWIL3Q7Z3Z3 882 aaKnown RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 TSEN54Q7Z6J9 526 aaKnown RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 IGFN1Q86VF2 1251 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 FBXL14Q8N1E6 418 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 FNDC8Q8TC99 324 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 PERPQ96FX8 193 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 TNFRSF13CQ96RJ3 184 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 KATNB1Q9BVA0 655 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 NELFAQ9H3P2 528 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 TAS2R1Q9NYW7 299 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 GRHPRQ9UBQ7 328 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 FBXL3Q9UKT7 428 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 MTORP42345 2549 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 MED13LQ71F56 2210 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 ACANP16112 2415 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 IGHV1-18A0A0C4DH31 117 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 UNC119BA6NIH7 251 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 ATP6V1G2-DDX39BF2Z307 99 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 CDC42EP2O14613 210 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
SRP54-206ENST00000555317 KRT36O76013 467 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 NDUFB2O95178 105 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 IGHMP01871 453 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 HLA-HP01893 362 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 OR8G3PP0DMU2 310 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 CBR1P16152 277 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 RASSF2P50749 326 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 FABP6P51161 128 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 NKX6-1P78426 367 aaPredicted RBP10.55□□□□□ -0.72
SRP54-206ENST00000555317 TESK1Q15569 626 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 MDP1Q86V88 176 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 WDFY1Q8IWB7 410 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 LRRC75A-AS1Q8N1F1 130 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 FAM169BQ8N8A8 192 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 LILRB1Q8NHL6 650 aaPredicted RBP10.55□□□□□ -0.72
SRP54-206ENST00000555317 FANK1Q8TC84 345 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 MCHR2Q969V1 340 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 TRMT61AQ96FX7 289 aaKnown RBP10.55□□□□□ -0.72
SRP54-206ENST00000555317 CLPTM1LQ96KA5 538 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 DHRS1Q96LJ7 313 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 RBP7Q96R05 134 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 DHRS9Q9BPW9 319 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 ALG12Q9BV10 488 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 CXXC4Q9H2H0 198 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 KCNN2Q9H2S1 579 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 DENND2DQ9H6A0 471 aaPredicted RBP10.55□□□□□ -0.72
SRP54-206ENST00000555317 MAGIXQ9H6Y5 334 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 TMEM38BQ9NVV0 291 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 MOKQ9UQ07 419 aa10.55□□□□□ -0.72
SRP54-206ENST00000555317 SH3PXD2BA1X283 911 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 TNFRSF11BO00300 401 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 IGKV3-15P01624 115 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 CD14P08571 375 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 CECR9P0C854 216 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 BMP4P12644 408 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 PTDSS1P48651 473 aaKnown RBP10.54□□□□□ -0.72
SRP54-206ENST00000555317 PTH2RP49190 550 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ATP5J2P56134 94 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ERVK-25P63136 954 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 RUNX1T1Q06455 604 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 PIGFQ07326 219 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 TRAP1Q12931 704 aaKnown RBP10.54□□□□□ -0.72
SRP54-206ENST00000555317 SEC23BQ15437 767 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 SLC36A2Q495M3 483 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 Q5PR19 223 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ARMC4Q5T2S8 1044 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 SHEQ5VZ18 495 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ZNF544Q6NX49 715 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 TMEM53Q6P2H8 277 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 LRFN4Q6PJG9 635 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ZNF627Q7L945 461 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 SLC16A14Q7RTX9 510 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 MUC15Q8N387 334 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 LINC00471Q8N535 108 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 IL17RDQ8NFM7 739 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 OR4F15Q8NGB8 312 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 NSMAFQ92636 917 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 ZNF570Q96NI8 536 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 TSPAN32Q96QS1 320 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 BTBD10Q9BSF8 475 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 MRPL13Q9BYD1 178 aaKnown RBP10.54□□□□□ -0.72
SRP54-206ENST00000555317 RNF121Q9H920 327 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 SMURF2Q9HAU4 748 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 CRNNQ9UBG3 495 aaPredicted RBP10.54□□□□□ -0.72
SRP54-206ENST00000555317 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
SRP54-206ENST00000555317 VPS13CQ709C8 3753 aa10.54□□□□□ -0.72
SRP54-206ENST00000555317 VSTM5A8MXK1 200 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 E7EQL1 145 aa10.53□□□□□ -0.72
SRP54-206ENST00000555317 DNAJC8O75937 253 aaPredicted RBP10.53□□□□□ -0.72
SRP54-206ENST00000555317 ATP5HO75947 161 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms