RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CHMLP26374 656 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 GDI1P31150 447 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 RORAP35398 523 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 SLC26A3P40879 764 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 GPR6P46095 362 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 NPBWR2P48146 333 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 TDGF1P3P51864 188 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 TGFBIQ15582 683 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 MPPED2Q15777 294 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 COX15Q7KZN9 410 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 PEX26Q7Z412 305 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF557Q8N988 423 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 OR2G2Q8NGZ5 317 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 BLOC1S5Q8TDH9 187 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 RNF138Q8WVD3 245 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 RDH5Q92781 318 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 ECSITQ9BQ95 431 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 TMEM59Q9BXS4 323 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 ILKAPQ9H0C8 392 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 XCL2Q9UBD3 114 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 NUP50Q9UKX7 468 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 TDRD6O60522 2096 aaKnown RBP3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 EIF2AK4Q9P2K8 1649 aaKnown RBP3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 PLA2R1Q13018 1463 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 LMTK2Q8IWU2 1503 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 PIK3R4Q99570 1358 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 TMEM2Q9UHN6 1383 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 LRRIQ1Q96JM4 1722 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 TRAF3IP2O43734 574 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 TNFSF13O75888 250 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 ALDOBP05062 364 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 CRYGBP07316 175 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 BTCP35070 178 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 TFPI2P48307 235 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 SUB1P53999 127 aaKnown RBP eCLIP3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 CCDC73Q6ZRK6 1079 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 TMEM135Q86UB9 458 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 GPR151Q8TDV0 419 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 PIBF1Q8WXW3 757 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 OR2M2Q96R28 347 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 PISDQ9UG56 409 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 CACNG2Q9Y698 323 aa3.64□□□□□ -1.83
CKS1BP1-201ENST00000555221 CCDC144AA2RUR9 1427 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 NOS1P29475 1434 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 MROH2AA6NES4 1674 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 PANO1I0J062 215 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 DLGAP1O14490 977 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 GOSR2O14653 212 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 GKN3PP0CG01 181 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 PNMA6AP0CW24 399 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 MGMTP16455 207 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 MRPS22P82650 360 aaKnown RBP3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 CKAP4Q07065 602 aaKnown RBP3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 UNC119Q13432 240 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 ARMC12Q5T9G4 340 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 FRMPD2BQ6IN97 320 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 CNIH2Q6PI25 160 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 CCDC54Q8NEL0 328 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 NPBQ8NG41 125 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 OR4F15Q8NGB8 312 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 OR2G3Q8NGZ4 309 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 MCOLN3Q8TDD5 553 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 GNPTGQ9UJJ9 305 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 STARD10Q9Y365 291 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 CSDC2Q9Y534 153 aaKnown RBP3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 UGGT1Q9NYU2 1555 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 RAB3GAP2Q9H2M9 1393 aa3.63□□□□□ -1.83
CKS1BP1-201ENST00000555221 ABCA6Q8N139 1617 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 NCOA3Q9Y6Q9 1424 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ERVK-7P63135 1459 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ABCC3O15438 1527 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 KIR2DL5BA0A0G2JN68 375 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 KIR2DL5BA0A0G2JPC4 375 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CTAGE15A4D2H0 777 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 MOSP00540 346 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CSF3P09919 207 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 RCC1P18754 421 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 HNRNPH3P31942 346 aaKnown RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF133P52736 654 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 RFX4Q33E94 735 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 VPS26BQ4G0F5 336 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 H2AFVQ71UI9 128 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CTAGE6Q86UF2 777 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 LHFPL3Q86UP9 236 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 MKXQ8IYA7 352 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 PUSL1Q8N0Z8 303 aaKnown RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 KIR2DL5AQ8N109 375 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZADH2Q8N4Q0 377 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 KIR2DL5BQ8NHK3 375 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 PLPPR1Q8TBJ4 325 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 RAB3IL1Q8TBN0 382 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ACER1Q8TDN7 264 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 NUP58Q9BVL2 599 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CLMPQ9H6B4 373 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 DCAF16Q9NXF7 216 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 CTNNA3Q9UI47 895 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 PACSIN2Q9UNF0 486 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms