RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NRIP3Q9NQ35 241 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 TVP23AA6NH52 213 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 TO15178 435 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 B3GALNT1O75752 331 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 GP1BBP13224 206 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 SPI1P17947 270 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 PSMB10P40306 273 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 PNLIPRP2P54317 469 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
SHMT2-212ENST00000554467 FOXK1P85037 733 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 CPEB2Q7Z5Q1 589 aaKnown RBP10.57□□□□□ -0.72
SHMT2-212ENST00000554467 MS4A15Q8N5U1 240 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 OR5W2Q8NH69 310 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 GPR119Q8TDV5 335 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 PHF21AQ96BD5 680 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
SHMT2-212ENST00000554467 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 KLF2Q9Y5W3 355 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-212ENST00000554467 EML6Q6ZMW3 1958 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 A0A087WV48 116 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 A0A1W2PRG6 482 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 H3BSH0 61 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 SUSD5O60279 629 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 HRGP04196 525 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 PUDPQ08623 228 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 OR5M1Q8NGP8 315 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 OR52N1Q8NH53 320 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ZC3H10Q96K80 434 aaKnown RBP10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM43Q9BTV4 400 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ING1Q9UK53 422 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-212ENST00000554467 CNOT1A5YKK6 2376 aaKnown RBP10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 SLC22A23A1A5C7 686 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 LANCL1O43813 399 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 SLC25A12O75746 678 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 IL1AP01583 271 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TFPIP10646 304 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ZP3P21754 424 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ANGPT1Q15389 498 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 MTFR2Q6P444 385 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM91Q6ZNR0 172 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 RHBDD1Q8TEB9 315 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 AP3S1Q92572 193 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 EVA1AQ9H8M9 152 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 FKBP7Q9Y680 259 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 R4GN57 208 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMED7-TICAM2A0A0A6YYA0 188 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 LGALS8O00214 317 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 RNF13O43567 381 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ORC5O43913 435 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 ASAH2BP0C7U1 165 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 MPLP40238 635 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 PON3Q15166 354 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 CHMP1BQ7LBR1 199 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 SYT9Q86SS6 491 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 JAZF1Q86VZ6 243 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TSPAN32Q96QS1 320 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM185BQ9H7F4 350 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 KLRF1Q9NZS2 232 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 GNG8Q9UK08 70 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 BAIAP2Q9UQB8 552 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 TMED7Q9Y3B3 224 aa10.56□□□□□ -0.72
SHMT2-212ENST00000554467 PTRH2Q9Y3E5 179 aaKnown RBP10.56□□□□□ -0.72
SHMT2-212ENST00000554467 OR6C76A6NM76 312 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ADAM10O14672 748 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 HIST1H2ABP04908 130 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PGCP20142 388 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 GPR85P60893 370 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 CBFBQ13951 182 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC23A3Q6PIS1 610 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ATRAIDQ6UW56 229 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 HIST3H2AQ7L7L0 130 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ARIH2OSQ8N7S6 290 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 AGBL5Q8NDL9 886 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 HIST1H2ACQ93077 130 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 KIAA1143Q96AT1 154 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 CNN2Q99439 309 aaKnown RBP10.55□□□□□ -0.72
SHMT2-212ENST00000554467 RXFP3Q9NSD7 469 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 TAS2R10Q9NYW0 307 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 MFSD2BA6NFX1 497 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 VSTM2BA6NLU5 285 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PRR32B1ATL7 298 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 MAGEB1P43366 347 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 P2RX1P51575 399 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC26A5P58743 744 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PRPS1P60891 318 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 RPS18P62269 152 aaKnown RBP10.55□□□□□ -0.72
SHMT2-212ENST00000554467 BCL2L15Q5TBC7 163 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PRAMEF20Q5VT98 475 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PEAR1Q5VY43 1037 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-212ENST00000554467 HDDC2Q7Z4H3 204 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms