RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 DHRS2Q13268 280 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 PDE7AQ13946 482 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 ZNF235Q14590 738 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 DCAF4L1Q3SXM0 396 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 MOGAT2Q3SYC2 334 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 PRAMEF17Q5VTA0 474 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 UNQ9370/PRO34162Q6UXP9 181 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 CERS6Q6ZMG9 384 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 TMED4Q7Z7H5 227 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 LINC01465Q8N7H1 131 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 ZNF283Q8N7M2 679 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 NAXEQ8NCW5 288 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 OR10H4Q8NGA5 316 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 OR8U1Q8NH10 309 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 RSC1A1Q92681 617 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 MIB2Q96AX9 1013 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 RRNAD1Q96FB5 475 aaKnown RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 DIRC2Q96SL1 478 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 BOCQ9BWV1 1114 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 PARD6GQ9BYG4 376 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 GSX1Q9H4S2 264 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 CBLN4Q9NTU7 201 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 CNIH4Q9P003 139 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 CACNG4Q9UBN1 327 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 STARD10Q9Y365 291 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 FBXO7Q9Y3I1 522 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 MMP24Q9Y5R2 645 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 A0A1W2PPQ1 181 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 J3QLW9 94 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TXNDC12O95881 172 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 FURINP09958 794 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 THEGLP0DJG4 465 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZNF19P17023 458 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GABRR1P24046 479 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ITPKBP27987 946 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 OR1E1P30953 314 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 HOXC12P31275 282 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TIA1P31483 386 aaKnown RBP eCLIP8.7□□□□□ -1.02
SIX4-202ENST00000554079 PNPLA4P41247 253 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 MC3RP41968 323 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CCR4P51679 360 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CLDN12P56749 244 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CHIT1Q13231 466 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 SERINC3Q13530 473 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 NR0B2Q15466 257 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 WSCD1Q658N2 575 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ARMC6Q6NXE6 501 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 METTL7BQ6UX53 244 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 MEPCEQ7L2J0 689 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 SLC16A14Q7RTX9 510 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZNF573Q86YE8 665 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZSCAN4Q8NAM6 433 aaPredicted RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 SLC24A4Q8NFF2 622 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 OR1N1Q8NGS0 311 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 OR13D1Q8NGV5 346 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 Q8WTZ3 238 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PCED1BQ96HM7 432 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PPP1R16AQ96I34 528 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PRRC1Q96M27 445 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 SLC17A9Q9BYT1 436 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TRPV4Q9HBA0 871 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GOLGA2P5Q9HBQ8 144 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ARL15Q9NXU5 204 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 STEAP1Q9UHE8 339 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CD84Q9UIB8 345 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 KCNG2Q9UJ96 466 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 LNP1A1A4G5 178 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 MYBPHLA2RUH7 354 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PIN1P1O15428 100 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TSPAN2O60636 221 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PRAMEF11O60813 436 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TMEM127O75204 238 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GGCTO75223 188 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 NTN1O95631 604 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 EPPINO95925 133 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CTSLP07711 333 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 CALCBP10092 127 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GTF2F2P13984 249 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 HNF1AP20823 631 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 RPIAP49247 311 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GATMP50440 423 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZNF774Q6NX45 483 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TAF8Q7Z7C8 310 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 FAM129CQ86XR2 697 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 VRK2Q86Y07 508 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 TRAPPC5Q8IUR0 188 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 SCN4BQ8IWT1 228 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ACOT4Q8N9L9 421 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms