RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 YTHDF1Q9BYJ9 559 aaKnown RBP12.86□□□□□ -0.35
SHMT2-210ENST00000553950 NMNAT2Q9BZQ4 307 aa12.86□□□□□ -0.35
SHMT2-210ENST00000553950 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
SHMT2-210ENST00000553950 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-210ENST00000553950 TINAGQ9UJW2 476 aa12.86□□□□□ -0.35
SHMT2-210ENST00000553950 EPG5Q9HCE0 2579 aa12.86□□□□□ -0.35
SHMT2-210ENST00000553950 TRGV8A0A0C4DH27 118 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 OR6C68A6NDL8 312 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 M0R129 80 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 SLC2A10O95528 541 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 IL18BPO95998 194 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 STSP08842 583 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 SPI1P17947 270 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 OPRM1P35372 400 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 OR3A2P47893 321 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 SELENOPP49908 381 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 SH3BGRP55822 239 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CDK5R2Q13319 367 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 C10orf128Q5T292 105 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 AADACL4Q5VUY2 407 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 ZBTB46Q86UZ6 589 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CNIH3Q8TBE1 160 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 ZNF582Q96NG8 517 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 NR1H4Q96RI1 486 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 PIGMQ9H3S5 423 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CNOT2Q9NZN8 540 aaKnown RBP12.85□□□□□ -0.35
SHMT2-210ENST00000553950 DNAJC27Q9NZQ0 273 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 TPRKBQ9Y3C4 175 aa12.85□□□□□ -0.35
SHMT2-210ENST00000553950 A0A1B0GUH1 482 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 FAM183AA6NL82 134 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 B8ZZF3 427 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 H7C1C5 153 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 SLC16A7O60669 478 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 FAM20BO75063 409 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 WBP4O75554 376 aaKnown RBP12.84□□□□□ -0.35
SHMT2-210ENST00000553950 GLCEO94923 617 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 TNFAIP8O95379 198 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 GLI4P10075 376 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 PIPP12273 146 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-210ENST00000553950 CTSSP25774 331 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-210ENST00000553950 MTNR1AP48039 350 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 GABARAPL2P60520 117 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 LCN6P62502 163 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 GGTLC2Q14390 218 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 NRN1LQ496H8 165 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 KLHL12Q53G59 568 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 C6orf141Q5SZD1 244 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 CARD17Q5XLA6 110 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 MEPCEQ7L2J0 689 aaKnown RBP12.84□□□□□ -0.35
SHMT2-210ENST00000553950 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 ZNF786Q8N393 782 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 OR9Q1Q8NGQ5 310 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 OR6K6Q8NGW6 343 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-210ENST00000553950 RND1Q92730 232 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 DDOQ99489 341 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 OR51V1Q9H2C8 321 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 PLCXD1Q9NUJ7 323 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 POLEQ07864 2286 aa12.84□□□□□ -0.35
SHMT2-210ENST00000553950 RP1L1Q8IWN7 2480 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 SLC1A7O00341 560 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 DVL2O14641 736 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ZNHIT1O43257 154 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ENTPD6O75354 484 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 QDPRP09417 244 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 CD8BP10966 210 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 SLC2A5P22732 501 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 FMO3P31513 532 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 CHN2P52757 468 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ACTC1P68032 377 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ACTA1P68133 377 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 SIRPAP78324 504 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 RUNX1T1Q06455 604 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 RAB40BQ12829 278 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 APOFQ13790 326 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 GLB1L2Q8IW92 636 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms