RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MRPS15P82914 257 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 PAX8Q06710 450 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CALCOCO2Q13137 446 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 KCNJ11Q14654 390 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ABRAXAS2Q15018 415 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 TRAM2Q15035 370 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NCF4Q15080 339 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 TRMT5Q32P41 509 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 NDUFAF6Q330K2 333 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MOGAT2Q3SYC2 334 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 FAM120AOSQ5T036 256 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OR2G6Q5TZ20 316 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 STUMQ69YW2 141 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ZNF470Q6ECI4 717 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ANKRD26P1Q6NSI1 321 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 C1orf94Q6P1W5 598 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 REG3GQ6UW15 175 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 C12orf54Q6X4T0 127 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ASCL4Q6XD76 172 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 Q6ZSR3 168 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ZNF621Q6ZSS3 439 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 FAM122BQ7Z309 247 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ZNF571Q7Z3V5 609 aaPredicted RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 HDDC2Q7Z4H3 204 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CMC1Q7Z7K0 106 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SLC26A11Q86WA9 606 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 IQCKQ8N0W5 287 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 METTL4Q8N3J2 472 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 GATSQ8NAP1 163 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 Q8NBF4 154 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NUP37Q8NFH4 326 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OR56A4Q8NGH8 313 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OR56B4Q8NH76 319 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 FNDC8Q8TC99 324 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ACER1Q8TDN7 264 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ADAMTS16Q8TE57 1224 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SETD7Q8WTS6 366 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 TFGQ92734 400 aaPredicted RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 NEIL2Q969S2 332 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NABP1Q96AH0 204 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MRGPRFQ96AM1 343 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 DYNLL2Q96FJ2 89 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 TMEM80Q96HE8 168 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OXGR1Q96P68 337 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OPALINQ96PE5 141 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 OR8B4Q96RC9 309 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SORT1Q99523 831 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ECSITQ9BQ95 431 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 C7orf50Q9BRJ6 194 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 TM2D1Q9BX74 207 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CHIAQ9BZP6 476 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ZYG11BQ9C0D3 744 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 HDHD2Q9H0R4 259 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CAB39LQ9H9S4 337 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 TMEM165Q9HC07 324 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CSNK1G1Q9HCP0 422 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ACP6Q9NPH0 428 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 EXOSC3Q9NQT5 275 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 MCUBQ9NWR8 336 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CLEC5AQ9NY25 188 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NKIRAS1Q9NYS0 192 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 KCNIP1Q9NZI2 227 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CCDC59Q9P031 241 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 RSPH14Q9UHP6 348 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ERVW-1Q9UQF0 538 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SLC17A4Q9Y2C5 497 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 POFUT2Q9Y2G5 429 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 V9GYY9 64 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MROH7Q68CQ1 1323 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MYO3BQ8WXR4 1341 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 USP6P35125 1406 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 AKNAQ7Z591 1439 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ATP10AO60312 1499 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 IGHV3-20A0A0C4DH32 117 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 IGHV3-38A0A0C4DH36 116 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 FAM231BA6NCW3 169 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RBMY1BA6NDE4 496 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 RBMY1EA6NEQ0 496 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 FAM166BA8MTA8 275 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 G3V3Y1 287 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GOLGA8RI6L899 631 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 TOR1AO14656 332 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 EIF4E2O60573 245 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 SCN2BO60939 215 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 FRAT2O75474 233 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 EEDO75530 441 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 SCRG1O75711 98 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GPX5O75715 221 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 SC5DO75845 299 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 LYPD3O95274 346 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 LSM8O95777 96 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 CD160O95971 181 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 IGHG4P01861 327 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 C2P06681 752 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RBMY1DP0C7P1 496 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 RBMY1A1P0DJD3 496 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 CALM1P0DP23 149 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CALM2P0DP24 149 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CALM3P0DP25 149 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 VDAC1P21796 283 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms