RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TXNDC15Q96J42 360 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 C1orf198Q9H425 327 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 TMEM106BQ9NUM4 274 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-204ENST00000553605 MARCOQ9UEW3 520 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-204ENST00000553605 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 TANC2Q9HCD6 1990 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 IGHV2-70DA0A0C4DH43 119 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ZSCAN5BA6NJL1 495 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 TMEM233B4DJY2 109 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 MS4A18H0YCH9 400 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 DHHO43323 396 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 OR2T1O43869 369 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 GPR137BO60478 399 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 FZD7O75084 574 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 CPSF4O95639 269 aaKnown RBP11.56□□□□□ -0.56
PRPF39-204ENST00000553605 PTHP01270 115 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ADH4P08319 380 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 FGF4P08620 206 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 PRG2P13727 222 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 GRPRP30550 384 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ARRB2P32121 409 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 BTG1P62324 171 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 MS4A18Q3C1V0 323 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF718Q3SXZ3 478 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 GPR157Q5UAW9 335 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 PEX5LQ8IYB4 626 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 SGCDQ92629 289 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 TAAR8Q969N4 342 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 SSBP3Q9BWW4 388 aaPredicted RBP11.56□□□□□ -0.56
PRPF39-204ENST00000553605 LRMDAQ9H2I8 198 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 RNF121Q9H920 327 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 CYSLTR2Q9NS75 346 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
PRPF39-204ENST00000553605 ZDHHC8Q9ULC8 765 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 TRIM33Q9UPN9 1127 aa11.56□□□□□ -0.56
PRPF39-204ENST00000553605 NPHS1O60500 1241 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 GLRA3O75311 464 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 HPRP00739 348 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CD55P08174 381 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 WNT2P09544 360 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 G6PDP11413 515 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CPA3P15088 417 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CBLP22681 906 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CHI3L1P36222 383 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-204ENST00000553605 LIPAP38571 399 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CLDN8P56748 225 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 LARS2Q15031 903 aaKnown RBP11.55□□□□□ -0.56
PRPF39-204ENST00000553605 ZMYND11Q15326 602 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 CCDC153Q494R4 210 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 XKR7Q5GH72 579 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 TMEM255AQ5JRV8 349 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 THEM4Q5T1C6 240 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 FAM69AQ5T7M9 428 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 TMEM53Q6P2H8 277 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF836Q6ZNA1 936 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 Q6ZSV7 163 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 ANKRD46Q86W74 232 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 VRK2Q86Y07 508 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 ZSCAN4Q8NAM6 433 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-204ENST00000553605 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
PRPF39-204ENST00000553605 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 TSPYL1Q9H0U9 437 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
PRPF39-204ENST00000553605 TET2Q6N021 2002 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-204ENST00000553605 KIR2DS1A0A191URI9 304 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 IQCMA0A1B0GVH7 501 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 PLIN3O60664 434 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 ENTPD5O75356 428 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 C1QCP02747 245 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 NR2F1P10589 423 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 NQO1P15559 274 aaKnown RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 MPV17P39210 176 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 TNFAIP6P98066 277 aaPredicted RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 SPATA46Q5T0L3 261 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 NET1Q7Z628 596 aaPredicted RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 CCDC63Q8NA47 563 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 ADPRHL1Q8NDY3 354 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 OR8J2Q8NGG1 315 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 OR52P1PQ8NH57 321 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 IPCEF1Q8WWN9 437 aaPredicted RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 DACT3Q96B18 629 aaPredicted RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 C3orf30Q96M34 536 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 SLC35A5Q9BS91 424 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.54□□□□□ -0.56
PRPF39-204ENST00000553605 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
PRPF39-204ENST00000553605 PRSS51A0A1B0GVH4 220 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 TNFRSF13BO14836 293 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 FARS2O95363 451 aaKnown RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 FUT4P22083 530 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 MDH2P40926 338 aaKnown RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 CSNK1A1P48729 337 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms