RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ZNF519Q8TB69 540 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 C18orf12Q96KH6 178 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 TXNIPQ9H3M7 391 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 B3GAT2Q9NPZ5 323 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 MAGEL2Q9UJ55 1249 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 GDF2Q9UK05 429 aaPredicted RBP16.72■□□□□ 0.27
PTCH1-227ENST00000553256 UGT2A1Q9Y4X1 527 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ARFGEF3Q5TH69 2177 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 IGHV2OR16-5A0A0B4J2B6 119 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 TRBV4-1A0A0J9YWV2 114 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 IGHG1P01857 330 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 QDPRP09417 244 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 TCN1P20061 433 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-227ENST00000553256 APOBEC3AP31941 199 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-227ENST00000553256 OMPP47874 163 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 FXYD6P3P58550 94 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 ANKDD1AQ495B1 522 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 ALG10Q5BKT4 473 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 GKAP1Q5VSY0 366 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-227ENST00000553256 AGAP6Q5VW22 663 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 NUP37Q8NFH4 326 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 PYURFQ96I23 114 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 GPA33Q99795 319 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 SMR3AQ99954 134 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 FAIMQ9NVQ4 179 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 ADAM21Q9UKJ8 722 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 POFUT2Q9Y2G5 429 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 TLN2Q9Y4G6 2542 aa16.71■□□□□ 0.27
PTCH1-227ENST00000553256 TRAV27A0A087WT01 109 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 A0A1W2PRG6 482 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 H7C417 338 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 DIRAS1O95057 198 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 H1F0P07305 194 aaKnown RBP16.7■□□□□ 0.26
PTCH1-227ENST00000553256 ZNF35P13682 527 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 IFNA8P32881 189 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 SLC9A3P48764 834 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 FABP6P51161 128 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 DAP3P51398 398 aaKnown RBP16.7■□□□□ 0.26
PTCH1-227ENST00000553256 IDH3GP51553 393 aaPredicted RBP16.7■□□□□ 0.26
PTCH1-227ENST00000553256 MSMPQ1L6U9 139 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 SLC25A47Q6Q0C1 308 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 C16orf89Q6UX73 402 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 FAM122BQ7Z309 247 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 SLC22A24Q8N4F4 322 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 OR13C2Q8NGS9 318 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 NABP1Q96AH0 204 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 NSL1Q96IY1 281 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 TSPAN32Q96QS1 320 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 DENND2DQ9H6A0 471 aaPredicted RBP16.7■□□□□ 0.26
PTCH1-227ENST00000553256 CA10Q9NS85 328 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 ZNF346Q9UL40 294 aaKnown RBP16.7■□□□□ 0.26
PTCH1-227ENST00000553256 ATP23Q9Y6H3 246 aa16.7■□□□□ 0.26
PTCH1-227ENST00000553256 hCG_2039718K7EN88 272 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 CRYAAP02489 173 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 IGFBP1P08833 259 aaPredicted RBP16.69■□□□□ 0.26
PTCH1-227ENST00000553256 PATE4P0C8F1 98 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 ATP6V1B2P21281 511 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 TAF11Q15544 211 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 ADIPOQQ15848 244 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 ETFDHQ16134 617 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 GSG1Q2KHT4 349 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 ZNF730Q6ZMV8 503 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 FOXL2NBQ6ZUU3 175 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 DEPDC4Q8N2C3 294 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 CCDC197Q8NCU1 140 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 OR51A7Q8NH64 312 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 HTRA1Q92743 480 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 CACNG6Q9BXT2 260 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 ZNF442Q9H7R0 627 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 SMURF2Q9HAU4 748 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 NDE1Q9NXR1 346 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 POU2F3Q9UKI9 436 aa16.69■□□□□ 0.26
PTCH1-227ENST00000553256 A0A096LNT2 108 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 TCRBV5S2A0A599 114 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 TMEM129A0AVI4 362 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 EFCAB9A8MZ26 197 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 B2RBV5 119 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 MCIDASD6RGH6 385 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 H7C1Q1 480 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 PDE5AO76074 875 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 MMP7P09237 267 aaPredicted RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 INHBBP09529 407 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 GPR4P46093 362 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 GIPRP48546 466 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 MNAT1P51948 309 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 RPL27P61353 136 aaKnown RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 MYBPC1Q00872 1141 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 EFNB3Q15768 340 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 RINLQ6ZS11 566 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 IGFN1Q86VF2 1251 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 FBXL14Q8N1E6 418 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 CLDN22Q8N7P3 220 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 SYT14Q8NB59 555 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 OR4F15Q8NGB8 312 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 GTPBP3Q969Y2 492 aaKnown RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 TRMT61AQ96FX7 289 aaKnown RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 GPX7Q96SL4 187 aaPredicted RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 ALG12Q9BV10 488 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms