RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FOXB1Q99853 325 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ALG12Q9BV10 488 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 CHID1Q9BWS9 393 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 SMURF2Q9HAU4 748 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 VNN3Q9NY84 501 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 POFUT2Q9Y2G5 429 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 SAMHD1Q9Y3Z3 626 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 RNF115Q9Y4L5 304 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 CREBBPQ92793 2442 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 A0A1W2PR80 420 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ARRDC5A6NEK1 342 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 DHHO43323 396 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 FKBP6O75344 327 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 PTP4A3O75365 173 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CIB2O75838 187 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CCNB2O95067 398 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CST1P01037 141 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CD3EP07766 207 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 B4GALT1P15291 398 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 FXYD6P3P58550 94 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CBX1P83916 185 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CD47Q08722 323 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 C3orf36Q3SXR2 165 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 NRN1LQ496H8 165 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 C10orf128Q5T292 105 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 C1orf146Q5VVC0 180 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 GPR139Q6DWJ6 353 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF813Q6ZN06 617 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF704Q6ZNC4 412 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF620Q6ZNG0 422 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ARIH2OSQ8N7S6 290 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF454Q8N9F8 522 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 PAPD5Q8NDF8 572 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 OR9Q2Q8NGE9 314 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 GNPDA2Q8TDQ7 276 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 HDAC2Q92769 488 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 NINJ1Q92982 152 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 NMD3Q96D46 503 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF570Q96NI8 536 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 NRIP3Q9NQ35 241 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 TMEM38BQ9NVV0 291 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 GRHPRQ9UBQ7 328 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 EDARQ9UNE0 448 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 ADAM18Q9Y3Q7 739 aa10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 PRRC2AP48634 2157 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-209ENST00000552896 CELSR1Q9NYQ6 3014 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 A0A096LPE4 126 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 A0A1W2PPZ6 126 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 DPRXA6NFQ7 191 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 SEC14L2O76054 403 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 QDPRP09417 244 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 APEHP13798 732 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 PTAFRP25105 342 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 CD40P25942 277 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 SDHAP31040 664 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 SLC6A6P31641 620 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ACVR1BP36896 505 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF83P51522 516 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF84P51523 738 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ERVK-25P63136 954 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 KRR1Q13601 381 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 MICAQ29983 383 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 MESTQ5EB52 335 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ADAM5Q6NVV9 412 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 LRFN4Q6PJG9 635 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 DPY19L2P2Q6ZN68 376 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ADCK1Q86TW2 530 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 SYT14Q8NB59 555 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 AQP11Q8NBQ7 271 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 NANOS1Q8WY41 292 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 NRGNQ92686 78 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 MCHR2Q969V1 340 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 DGCR6LQ9BY27 220 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 OR52D1Q9H346 318 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 CCM2LQ9NUG4 571 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 CRNNQ9UBG3 495 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ST6GALNAC2Q9UJ37 374 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF346Q9UL40 294 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 MGAT4BQ9UQ53 548 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 CDH10Q9Y6N8 788 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 U3KQV3 271 aa10.23□□□□□ -0.77
TRAFD1-209ENST00000552896 ARID1AO14497 2285 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 TEX13CA0A0J9YWL9 993 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 M0R1B8 84 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 XKRYO14609 159 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 ABCD4O14678 606 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 HS3ST1O14792 307 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 AHCYL1O43865 530 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 SLC2A10O95528 541 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 TXNDC12O95881 172 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 IGKV3-15P01624 115 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 RAF1P04049 648 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 ERFP50548 548 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms