RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ALKBH3Q96Q83 286 aaPredicted RBP9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 FOXB1Q99853 325 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 FUZQ9BT04 418 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 MRPL13Q9BYD1 178 aaKnown RBP9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 SIAEQ9HAT2 523 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 NRIP3Q9NQ35 241 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 MED29Q9NX70 200 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 IL20Q9NYY1 176 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 KIF17Q9P2E2 1029 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC25A15Q9Y619 301 aa9.02□□□□□ -0.97
TRAFD1-208ENST00000552890 ABCA12Q86UK0 2595 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TRAV27A0A087WT01 109 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC22A23A1A5C7 686 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 KLF4O43474 513 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 PTP4A3O75365 173 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 UPK3AO75631 287 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 DIRAS1O95057 198 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 RAB36O95755 333 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 HRGP04196 525 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 QDPRP09417 244 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 HLA-DOBP13765 273 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 CBR1P16152 277 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 CDH2P19022 906 aaPredicted RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 KLK2P20151 261 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 CCKARP32238 428 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 PTDSS1P48651 473 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 MRPS34P82930 218 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 ARF1P84077 181 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TBRG1Q3YBR2 411 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC36A3Q495N2 470 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 NCMAPQ5T1S8 102 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 CARD17Q5XLA6 110 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TBPL2Q6SJ96 375 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 ARL9Q6T311 187 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 NHLRC1Q6VVB1 395 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TSEN54Q7Z6J9 526 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 SYT9Q86SS6 491 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 NAV2Q8IVL1 2488 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 OR2T33Q8NG76 320 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 OR10G2Q8NGC3 310 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 OR13C2Q8NGS9 318 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TEX47Q8TBZ9 253 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 PIK3IP1Q96FE7 263 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 PLPPR2Q96GM1 343 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 ZC3HAV1LQ96H79 300 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 TXNDC15Q96J42 360 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 KCNK17Q96T54 332 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 EMC6Q9BV81 110 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 KATNB1Q9BVA0 655 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 IFT27Q9BW83 186 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 SEC14L4Q9UDX3 406 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 KLHL21Q9UJP4 597 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 CDH10Q9Y6N8 788 aa9.01□□□□□ -0.97
TRAFD1-208ENST00000552890 IQCMA0A1B0GVH7 501 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 PRSS37A4D1T9 235 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 C12orf71A8MTZ7 269 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CDC42EP2O14613 210 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ARHGEF9O43307 516 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 PIP5K1CO60331 668 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 HMGN1P05114 100 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 PTNP21246 168 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 PAICSP22234 425 aaKnown RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 TUBG1P23258 451 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 NTF4P34130 210 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CAPZA2P47755 286 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ACTR3P61158 418 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 GLO1Q04760 184 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 KRR1Q13601 381 aaKnown RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 KEAP1Q14145 624 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 SEC23BQ15437 767 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 GSG1Q2KHT4 349 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 PGBD2Q6P3X8 592 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 SHQ1Q6PI26 577 aaKnown RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF620Q6ZNG0 422 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CDC20BQ86Y33 519 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC22A24Q8N4F4 322 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ATG16L2Q8NAA4 619 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 AQP11Q8NBQ7 271 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 OR4C15Q8NGM1 316 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 MOSPD2Q8NHP6 518 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 STMN2Q93045 179 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 MCHR2Q969V1 340 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CENPNQ96H22 339 aaPredicted RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 LURAP1Q96LR2 239 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC38A2Q96QD8 506 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 OR52D1Q9H346 318 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 NELFAQ9H3P2 528 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CXorf56Q9H5V9 222 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CCNB1IP1Q9NPC3 277 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 TUBG2Q9NRH3 451 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ZKSCAN7Q9P0L1 754 aaPredicted RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 CRNNQ9UBG3 495 aaPredicted RBP9□□□□□ -0.97
TRAFD1-208ENST00000552890 KCNG2Q9UJ96 466 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 POU2F3Q9UKI9 436 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF346Q9UL40 294 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms