RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 C17orf100A8MU93 164 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 C11orf98E9PRG8 122 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 WNT9BO14905 357 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 DHHO43323 396 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 SERPINI2O75830 405 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 PNPP00491 289 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 PTHP01270 115 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 AQP1P29972 269 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 TEKQ02763 1124 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 RBBP4Q09028 425 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF74Q16587 644 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 MOGQ16653 247 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ACSM5Q6NUN0 579 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 TMEM53Q6P2H8 277 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 TMEM154Q6P9G4 183 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 LRFN4Q6PJG9 635 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 C11orf65Q8NCR3 313 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 OR1J2Q8NGS2 313 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 FGFBP3Q8TAT2 258 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF519Q8TB69 540 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 SYNPRQ8TBG9 265 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 FAM216AQ8WUB2 273 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ARHGDIGQ99819 225 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 CCDC28BQ9BUN5 200 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 PLA2G12AQ9BZM1 189 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 SLC19A3Q9BZV2 496 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 IKZF5Q9H5V7 419 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 NARFLQ9H6Q4 476 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 HINT3Q9NQE9 182 aaKnown RBP10.99□□□□□ -0.65
PTCH1-221ENST00000550914 NANSQ9NR45 359 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 TAS2R5Q9NYW4 299 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 TAAR3PQ9P1P4 343 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF229Q9UJW7 825 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 FZR1Q9UM11 496 aa10.99□□□□□ -0.65
PTCH1-221ENST00000550914 CENPBD1B2RD01 187 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 RNF13O43567 381 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 ERLIN1O75477 346 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 VIMP08670 466 aaKnown RBP10.98□□□□□ -0.65
PTCH1-221ENST00000550914 PATE4P0C8F1 98 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 PGA4P0DJD7 388 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 PGA3P0DJD8 388 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 CRYBB2P43320 205 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 RAD52P43351 418 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 IDH3AP50213 366 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 ATP4BP51164 291 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 HILS1P60008 231 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 SLC36A2Q495M3 483 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 SNX33Q8WV41 574 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 C11orf40Q8WZ69 217 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 RAB39BQ96DA2 213 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 MPP4Q96JB8 637 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 CPPED1Q9BRF8 314 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF426Q9BUY5 554 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 BCL2L14Q9BZR8 327 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 LRMDAQ9H2I8 198 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF665Q9H7R5 613 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 CDH20Q9HBT6 801 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 G6PC2Q9NQR9 355 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-221ENST00000550914 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
PTCH1-221ENST00000550914 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 ARHGAP32A7KAX9 2087 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 A0A0G2JMP0 313 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 A0A0X1KG70 313 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TRIM77I1YAP6 450 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 J3QLI3 93 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 M0R3H8 397 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 LYPD3O95274 346 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 CH25HO95992 272 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 CLPTM1O96005 669 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 IGHG1P01857 330 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 MT-ND5P03915 603 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 HIST1H2ABP04908 130 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 EPHA1P21709 976 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 MAGEB1P43366 347 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 LIMS1P48059 325 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 ARFIP2P53365 341 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 UCP2P55851 309 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 ACTG1P63261 375 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 CCL8P80075 99 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 PLP2Q04941 152 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 HIST3H3Q16695 136 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 DUSP7Q16829 419 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 RUNDC3AQ59EK9 446 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 FAM209AQ5JX71 171 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 ENTPD8Q5MY95 495 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 FAHD2BQ6P2I3 314 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TTC33Q6PID6 262 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-221ENST00000550914 DLEU7Q6UYE1 221 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 HIST3H2AQ7L7L0 130 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 SLC16A14Q7RTX9 510 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 HDDC2Q7Z4H3 204 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 PTOV1Q86YD1 416 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 SLC30A8Q8IWU4 369 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms