RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CD80P33681 288 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 MMP15P51511 669 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 LARS2Q15031 903 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 TAF9Q16594 264 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 TBC1D28Q2M2D7 210 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 RNF220Q5VTB9 566 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 NHLRC1Q6VVB1 395 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 ZNF621Q6ZSS3 439 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 NET1Q7Z628 596 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 CPEB3Q8NE35 698 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 FAM110DQ8TAY7 271 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 GEMIN6Q8WXD5 167 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 SLC38A4Q969I6 547 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 BCL2L14Q9BZR8 327 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 EGLN1Q9GZT9 426 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 PATZ1Q9HBE1 687 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 DCAF16Q9NXF7 216 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 ZNF232Q9UNY5 417 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 POLR3KQ9Y2Y1 108 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 CHST2Q9Y4C5 530 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 NPTNQ9Y639 398 aa9.1□□□□□ -0.95
TRAFD1-206ENST00000549358 TRAV36DV7A0A075B6V5 113 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 A0A087WUJ7 227 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SLC22A31A6NKX4 558 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 TM9SF1O15321 606 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 FZD7O75084 574 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SNAP29O95721 258 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 IGHV2-70P01814 119 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 AHCYP23526 432 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 VAMP1P23763 118 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 S100A3P33764 101 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 CDKN2CP42773 168 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 TXNL4AP83876 142 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 PAX8Q06710 450 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 PMS2P3Q13401 168 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 HLXQ14774 488 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SMU1Q2TAY7 513 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SPRNQ5BIV9 151 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SPATA46Q5T0L3 261 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 WDR88Q6ZMY6 472 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 C17orf53Q8N3J3 647 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 SPICQ8N5J4 248 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 TRIML2Q8N7C3 387 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 OR1J2Q8NGS2 313 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 TESCQ96BS2 214 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 CCDC115Q96NT0 180 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 DIRC2Q96SL1 478 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 LRMDAQ9H2I8 198 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 ARMC7Q9H6L4 198 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 AKTIPQ9H8T0 292 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 TCF7L2Q9NQB0 619 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 RPS6KB2Q9UBS0 482 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 OR5V1Q9UGF6 321 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 BTNL2Q9UIR0 455 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 GPR45Q9Y5Y3 372 aa9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 NUP214P35658 2090 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-206ENST00000549358 IGKV1D-42A0A075B6H8 117 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 IQCMA0A1B0GVH7 501 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 ZSCAN5BA6NJL1 495 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SRRM5B3KS81 715 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 PIN1P1O15428 100 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 MFN2O95140 757 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 NDUFA7O95182 113 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 PLATP00750 562 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 PTHP01270 115 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SHBGP04278 402 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 BCHEP06276 602 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 FAM153BP0C7A2 387 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 CCNOP22674 350 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 RPS26P11Q5JNZ5 115 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 TMEM255AQ5JRV8 349 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 THEM4Q5T1C6 240 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 TMEM53Q6P2H8 277 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 C5orf46Q6UWT4 87 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 C6orf89Q6UWU4 347 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 Q6ZPA2 131 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 ADPRHL1Q8NDY3 354 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 OR10S1Q8NGN2 331 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SLC38A5Q8WUX1 472 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SLC41A3Q96GZ6 507 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SLC30A2Q9BRI3 323 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 SPATA9Q9BWV2 254 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 ASPNQ9BXN1 380 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 RSPO3Q9BXY4 272 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 CHIAQ9BZP6 476 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 MARCH7Q9H992 704 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 CACYBPQ9HB71 228 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 CALML5Q9NZT1 146 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 KLHL14Q9P2G3 628 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 P2RX2Q9UBL9 471 aa9.08□□□□□ -0.96
TRAFD1-206ENST00000549358 TRAV40A0A0B4J280 105 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms