RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 IPCEF1Q8WWN9 437 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 CPNE4Q96A23 557 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 LGALS12Q96DT0 336 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 Q96MT0 163 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 SNX18Q96RF0 628 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 TIMP4Q99727 224 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 NAA11Q9BSU3 229 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 EMC6Q9BV81 110 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 SYT4Q9H2B2 425 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 OR51V1Q9H2C8 321 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 EXO5Q9H790 373 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 RPRD1BQ9NQG5 326 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF71Q9NQZ8 489 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 TAS2R16Q9NYV7 291 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 VSX1Q9NZR4 365 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 SCOCQ9UIL1 159 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 ING1Q9UK53 422 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 NPIPA1Q9UND3 350 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 RPL36Q9Y3U8 105 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 NOX1Q9Y5S8 564 aa7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-207ENST00000549249 LAMA5O15230 3695 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 IGLV1-36A0A0B4J1U3 117 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FAM171A2A8MVW0 826 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 J3QRE1 110 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 AQP7O14520 342 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 RGS10O43665 173 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CYTIPO60759 359 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 AQP8O94778 261 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FADS2O95864 444 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CLPTM1O96005 669 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 RENP00797 406 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PSKH1P11801 424 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PLA2G2AP14555 144 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CPN1P15169 458 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CTLA4P16410 223 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF43P17038 809 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PAICSP22234 425 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 NTF4P34130 210 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 MTNR1AP48039 350 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ALDH3B2P48448 385 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 DAP3P51398 398 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CLDN17P56750 224 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 TUBA4AP68366 448 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FMODQ06828 376 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CAMK2DQ13557 499 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ETFDHQ16134 617 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 KLHL12Q53G59 568 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PDSS1Q5T2R2 415 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 EEF1A1P5Q5VTE0 462 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FAM205BPQ63HN1 556 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF324BQ6AW86 544 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 XAF1Q6GPH4 301 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 TMEM225Q6GV28 225 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 KCTD8Q6ZWB6 473 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CREB3L2Q70SY1 520 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FCRLAQ7L513 359 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PRSS48Q7RTY5 328 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 TMEM123Q8N131 208 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 OR6V1Q8N148 313 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZIC4Q8N9L1 334 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 NOXO1Q8NFA2 376 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 OR4F15Q8NGB8 312 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 OR51L1Q8NGJ5 315 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 OR6X1Q8NH79 312 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 RNF128Q8TEB7 428 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ABHD3Q8WU67 409 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FAR1Q8WVX9 515 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PNPLA2Q96AD5 504 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 NMD3Q96D46 503 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZMYND19Q96E35 227 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZHX1-C8orf76Q96EF9 292 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 RNFT2Q96EX2 444 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF385AQ96PM9 386 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 TEAD3Q99594 435 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 TUBA1CQ9BQE3 449 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 MRPL13Q9BYD1 178 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 PRDM14Q9GZV8 571 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 NUAK2Q9H093 628 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FGF20Q9NP95 211 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CCNB1IP1Q9NPC3 277 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 H2AFY2Q9P0M6 372 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 WARS2Q9UGM6 360 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 EXOGQ9Y2C4 368 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 FLVCR1Q9Y5Y0 555 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 COMMD3-BMI1R4GMX3 469 aa7.19□□□□□ -1.26
DEPDC4-207ENST00000549249 CACNA1CQ13936 2221 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 A0A1B0GTH9 108 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 A6NIZ1 184 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC22A31A6NKX4 558 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 NPIPA2E9PIF3 369 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 NPIPA3F8WFD2 350 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 XKRYO14609 159 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SELENOFO60613 162 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 MRPS14O60783 128 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 C1QL1O75973 258 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 GLCEO94923 617 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 VAMP5O95183 116 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms