RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CDV3Q9UKY7 258 aaKnown RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 CACNA1CQ13936 2221 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 A0A087WUJ7 227 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.46□□□□□ -0.42
HDAC7-228ENST00000548938 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.46□□□□□ -0.42
HDAC7-228ENST00000548938 SIGLEC6O43699 453 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 WNT11O96014 354 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 PRSS3P35030 304 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 LRRC37A5PQ49AS3 106 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 FCRL6Q6DN72 434 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF595Q8IYB9 648 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 GABRG1Q8N1C3 465 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 C1orf198Q9H425 327 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF304Q9HCX3 659 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.42
HDAC7-228ENST00000548938 LYRM4Q9HD34 91 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 OBP2AQ9NY56 170 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 MSRAQ9UJ68 235 aa12.46□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM82A0PJX8 343 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 URADA6NGE7 173 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 M0QYG6 137 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF10P21506 573 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ADPRHP54922 357 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 HYAL1Q12794 435 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ATXN7L3Q14CW9 347 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 PDGFRLQ15198 375 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 OR1J2Q8NGS2 313 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 OR10G6Q8NH81 332 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 GAL3ST1Q99999 423 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 THAP10Q9P2Z0 257 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 GMEB2Q9UKD1 530 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 DTX4Q9Y2E6 619 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 HEBP2Q9Y5Z4 205 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 HEATR5AQ86XA9 2040 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF98A6NK75 572 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 GPR31O00270 319 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 PMS2P2O95744 297 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 PGDP52209 483 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 DMWDQ09019 674 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 SGCGQ13326 291 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 NR0B2Q15466 257 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 C2orf27AQ580R0 203 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 OTPQ5XKR4 325 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM88Q6PEY1 159 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF550Q7Z398 422 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 OR2W3Q7Z3T1 314 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 PRSS35Q8N3Z0 413 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 KCNRGQ8N5I3 272 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 OR5T2Q8NGG2 359 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 GPR148Q8TDV2 347 aa12.45□□□□□ -0.42
HDAC7-228ENST00000548938 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-228ENST00000548938 SPTBN5Q9NRC6 3674 aaKnown RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 IGKV1D-42A0A075B6H8 117 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 A0A0D9SG52 128 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 OR5H14A6NHG9 310 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 HRKO00198 91 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 CCSO14618 274 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 GP1BAP07359 652 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 PVRP15151 417 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 AKR1D1P51857 326 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 SCAND1P57086 179 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ISXQ2M1V0 245 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 FIGLAQ6QHK4 219 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 LRRC69Q6ZNQ3 347 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 RNF44Q7L0R7 432 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 CAMKVQ8NCB2 501 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 OR6N2Q8NGY6 317 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ASB13Q8WXK3 278 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ANKRD9Q96BM1 317 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 RBM18Q96H35 190 aaKnown RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 TINAGL1Q9GZM7 467 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 COMMD4Q9H0A8 199 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 ALX4Q9H161 411 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-228ENST00000548938 SLC39A1Q9NY26 324 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 LAMP5Q9UJQ1 280 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 SPACA6W5XKT8 324 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 MPDZO75970 2070 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 A0A1W2PQU0 124 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 H0YGG7 62 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 BCL2L11O43521 198 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 RAD1O60671 282 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 AKR7A3O95154 331 aa12.44□□□□□ -0.42
HDAC7-228ENST00000548938 GPANK1O95872 356 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms