RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ELFN2Q5R3F8 820 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 GKAP1Q5VSY0 366 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC26A7Q8TE54 656 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 C1orf159Q96HA4 380 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 FZR1Q9UM11 496 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 DHHO43323 396 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 HPXP02790 462 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 OR8G3PP0DMU2 310 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 UMPSP11172 480 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 TNFRSF1BP20333 461 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 SEC24CP53992 1094 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 CCNIQ14094 377 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 HIST3H3Q16695 136 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 NANOGP8Q6NSW7 305 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 CALHM3Q86XJ0 350 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 PAQR4Q8N4S7 273 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 LINC01356Q8N9X3 169 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 NOXO1Q8NFA2 376 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 PFN4Q8NHR9 129 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 RASSF5Q8WWW0 418 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 SEPHS2Q99611 448 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 SH3GL3Q99963 347 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 MS4A5Q9H3V2 200 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 VIPAS39Q9H9C1 493 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 NANOGQ9H9S0 305 aa14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-205ENST00000548650 ENTPD5O75356 428 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 NCR1O76036 304 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 IGHG1P01857 330 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 H2AFXP16104 143 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 TCN1P20061 433 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 LSP1P33241 339 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 UGT2B15P54855 530 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 RUNX1T1Q06455 604 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 RPL18Q07020 188 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 METTL21CQ5VZV1 264 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 HDXQ7Z353 690 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 CARM1Q86X55 608 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC30A7Q8NEW0 376 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 OR4K5Q8NGD3 323 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 OR8J3Q8NGG0 315 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 TMEM255BQ8WV15 326 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 ZNF347Q96SE7 839 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 C19orf24Q9BVV8 132 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 TMEM120AQ9BXJ8 343 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 SH3GLB1Q9Y371 365 aa14.92□□□□□ -0.02
CHMP1A-205ENST00000548650 A0A1W2PPW3 197 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 FARS2O95363 451 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 BCL10O95999 233 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 MT-ND1P03886 318 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 HIST1H2ABP04908 130 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 QDPRP09417 244 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 ACHEP22303 614 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 RBM34P42696 430 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 CLRN1P58418 232 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 CYLC2Q14093 348 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 NRN1LQ496H8 165 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 HIST3H2AQ7L7L0 130 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 NKAIN4Q8IVV8 208 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 ASB10Q8WXI3 467 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 HIST1H2ACQ93077 130 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 YIPF5Q969M3 257 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 MCHR2Q969V1 340 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 MRPL13Q9BYD1 178 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 C20orf141Q9NUB4 165 aa14.91□□□□□ -0.02
CHMP1A-205ENST00000548650 MCIDASD6RGH6 385 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 BLOC1S5-TXNDC5H3BN57 136 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 SHOX2O60902 331 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 OR7A10O76100 309 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 OR5F1O95221 314 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 SNAP29O95721 258 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 IGF2P01344 180 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 F13BP05160 661 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 TSPAN19P0C672 248 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 FAM157BP0CG42 384 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 NAT2P11245 290 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 CCL2P13500 99 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 ZNF133P52736 654 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 TAS2R41P59536 307 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 MYBPC1Q00872 1141 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC36A2Q495M3 483 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 COQ5Q5HYK3 327 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 REP15Q6BDI9 236 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 RGS7BPQ6MZT1 257 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 DEF8Q6ZN54 512 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 DPPA2Q7Z7J5 298 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 CLDND2Q8NHS1 167 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 RDH5Q92781 318 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 LRRC58Q96CX6 371 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 POLR2J2Q9GZM3 115 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 RACGAP1Q9H0H5 632 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 POLR2J3Q9H1A7 115 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 C1orf198Q9H425 327 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 DUSP13Q9UII6 198 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 BAG5Q9UL15 447 aa14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 ZNF346Q9UL40 294 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-205ENST00000548650 IGLV3-9A0A075B6K5 115 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 A0A1W2PRG6 482 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 CENPBD1B2RD01 187 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 TRMUO75648 421 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms