RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 KLF9Q13886 244 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC35D2Q76EJ3 337 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 DNAAF1Q8NEP3 725 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 STK35Q8TDR2 534 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 GCDHQ92947 438 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 ULBP3Q9BZM4 244 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 VSX1Q9NZR4 365 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 TRAV8-7A0A075B6U6 113 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 IGLV1-36A0A0B4J1U3 117 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 A0A1B0GTQ1 180 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 TRABD2BA6NFA1 517 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 CTLA4P16410 223 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 EPHA8P29322 1005 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 KIR3DL2P43630 455 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 CCR6P51684 374 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 MELKQ14680 651 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 PWWP2BQ6NUJ5 590 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 LRRN1Q6UXK5 716 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 LINGO2Q7L985 606 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 LIX1LQ8IVB5 337 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ZNF676Q8N7Q3 588 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ASCC1Q8N9N2 400 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 FSCN3Q9NQT6 498 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ING3Q9NXR8 418 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SIT1Q9Y3P8 196 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ADAMTS9Q9P2N4 1935 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 TRBV5-7A0A0A0MS05 114 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC22A23A1A5C7 686 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM200CA6NKL6 621 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 A6NL46 340 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM212A6NML5 194 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 FTCDNL1E5RQL4 147 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SMLR1H3BR10 107 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 PHYHO14832 338 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ZNF254O75437 659 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 OR6A2O95222 327 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 AHSA1O95433 338 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 IGHMP01871 453 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 MT-ND4P03905 459 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 HLA-DOBP13765 273 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SDHBP21912 280 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 GDNFP39905 211 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 DHPSP49366 369 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 CCL7P80098 99 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ACY1Q03154 408 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 FAPQ12884 760 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 MEP1BQ16820 701 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 WDR38Q5JTN6 314 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 KDM8Q8N371 416 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SYNPRQ8TBG9 265 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SCMH1Q96GD3 660 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 C4orf45Q96LM5 186 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 OR8B4Q96RC9 309 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 CACNG6Q9BXT2 260 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 COMMD4Q9H0A8 199 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SLITRK2Q9H156 845 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ELOVL3Q9HB03 270 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 SUSD2Q9UGT4 822 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 NUBP2Q9Y5Y2 271 aa16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 TNRC6BQ9UPQ9 1833 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-208ENST00000548436 ALOX12BO75342 701 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 DHFRP00374 187 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 C1QBP02746 253 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 PNLIPP16233 465 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 GZMKP49863 264 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 RPS15P62841 145 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 MISPQ8IVT2 679 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM106AQ96A25 262 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 GHITMQ9H3K2 345 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 RALGAPA1Q6GYQ0 2036 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 C7orf66A4D0T2 115 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM127O75204 238 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 SCRG1O75711 98 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 MAS1P04201 325 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 CALCBP10092 127 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 SQSTM1Q13501 440 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC17A1Q14916 467 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 NDUFA5Q16718 116 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 LYSMD4Q5XG99 296 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 DND1Q8IYX4 353 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 OR8K3Q8NH51 312 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 GPR148Q8TDV2 347 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM234Q8WY98 164 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 PMEPA1Q969W9 287 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 ARL5BQ96KC2 179 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 WDR77Q9BQA1 342 aaPredicted RBP16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 MRPL15Q9P015 296 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 FOXJ3Q9UPW0 622 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 KIF26BQ2KJY2 2108 aa16.68■□□□□ 0.26
PRPF40B-208ENST00000548436 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 IGHV5-10-1A0A0J9YXX1 117 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 ANKUB1A6NFN9 424 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 HSPB2A8KAH6 182 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 OR2T1O43869 369 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 ZNF432O94892 652 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 SPARCP09486 303 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 ERP29P30040 261 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms