RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TMEM38BQ9NVV0 291 aa17.46■□□□□ 0.39
SSH1-207ENST00000547862 HIF1ANQ9NWT6 349 aa17.46■□□□□ 0.39
SSH1-207ENST00000547862 TAAR3PQ9P1P4 343 aa17.46■□□□□ 0.39
SSH1-207ENST00000547862 LEF1Q9UJU2 399 aaPredicted RBP17.46■□□□□ 0.39
SSH1-207ENST00000547862 FBXL3Q9UKT7 428 aa17.46■□□□□ 0.39
SSH1-207ENST00000547862 M0QX08 132 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 CLPTM1O96005 669 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 SERPINA5P05154 406 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 LCKP06239 509 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 OR8G3PP0DMU2 310 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 ATP4BP51164 291 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 PCBP3P57721 371 aaKnown RBP17.45■□□□□ 0.38
SSH1-207ENST00000547862 CLRN1P58418 232 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 RUNDC3AQ59EK9 446 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 AVPI1Q5T686 147 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 REP15Q6BDI9 236 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 TMEM53Q6P2H8 277 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 PIWIL3Q7Z3Z3 882 aaKnown RBP17.45■□□□□ 0.38
SSH1-207ENST00000547862 NANOGNBQ7Z5D8 188 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 OR6X1Q8NH79 312 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 SNX33Q8WV41 574 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 TMEM186Q96B77 213 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 LRRC37BQ96QE4 947 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 DENND2DQ9H6A0 471 aaPredicted RBP17.45■□□□□ 0.38
SSH1-207ENST00000547862 EVA1AQ9H8M9 152 aa17.45■□□□□ 0.38
SSH1-207ENST00000547862 ZNF346Q9UL40 294 aaKnown RBP17.45■□□□□ 0.38
SSH1-207ENST00000547862 MCIDASD6RGH6 385 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 ANGPT2O15123 496 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 FMO6PO60774 539 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 FARS2O95363 451 aaKnown RBP17.44■□□□□ 0.38
SSH1-207ENST00000547862 THY1P04216 161 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 HIST1H2ABP04908 130 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 MSMBP08118 114 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 BEND6Q5SZJ8 279 aaPredicted RBP17.44■□□□□ 0.38
SSH1-207ENST00000547862 HIST3H2AQ7L7L0 130 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 TSPYL5Q86VY4 417 aaPredicted RBP17.44■□□□□ 0.38
SSH1-207ENST00000547862 SLC26A7Q8TE54 656 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 HIST1H2ACQ93077 130 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 TAS2R5Q9NYW4 299 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 GRIP1Q9Y3R0 1128 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 GMEB1Q9Y692 573 aa17.44■□□□□ 0.38
SSH1-207ENST00000547862 TRAPPC13A5PLN9 417 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 DHHO43323 396 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 TPD52L2O43399 206 aaKnown RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 VENTXO95231 258 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 LYPD3O95274 346 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 TFP02787 698 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 QDPRP09417 244 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 PGA4P0DJD7 388 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 PGA3P0DJD8 388 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 GAAP10253 952 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 KLF3P57682 345 aaPredicted RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 CCL8P80075 99 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 MVKQ03426 396 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 NFYCQ13952 458 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 C12orf54Q6X4T0 127 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 LINC00114Q6XXX2 140 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 SLC16A14Q7RTX9 510 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 MEX3DQ86XN8 651 aaKnown RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 LRRC18Q8N456 261 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 NOXO1Q8NFA2 376 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 OR51F2Q8NH61 342 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 GTF3AQ92664 365 aaKnown RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 SLC25A44Q96H78 314 aaPredicted RBP17.43■□□□□ 0.38
SSH1-207ENST00000547862 ZNF347Q96SE7 839 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 CGREF1Q99674 301 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 ZNF416Q9BWM5 594 aa17.43■□□□□ 0.38
SSH1-207ENST00000547862 BLOC1S5-TXNDC5H3BN57 136 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 ENTPD5O75356 428 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 BCL10O95999 233 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 IGHG1P01857 330 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 F13BP05160 661 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 CD247P20963 164 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 SELENOVP59797 346 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 TBC1D28Q2M2D7 210 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 TMEM154Q6P9G4 183 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 LRFN4Q6PJG9 635 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 RETREG3Q86VR2 466 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 SYT14Q8NB59 555 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 RBM15BQ8NDT2 890 aaKnown RBP17.42■□□□□ 0.38
SSH1-207ENST00000547862 SYNPRQ8TBG9 265 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 TAMM41Q96BW9 452 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 HINT3Q9NQE9 182 aaKnown RBP17.42■□□□□ 0.38
SSH1-207ENST00000547862 ZNF229Q9UJW7 825 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 NDUFAF1Q9Y375 327 aa17.42■□□□□ 0.38
SSH1-207ENST00000547862 RP2O75695 350 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 TNFRSF1BP20333 461 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 CCNOP22674 350 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 PCGF2P35227 344 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 ZNF84P51523 738 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 ACTG1P63261 375 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 HSF2Q03933 536 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 RUNX1T1Q06455 604 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 ZP4Q12836 540 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 SLC36A2Q495M3 483 aa17.41■□□□□ 0.38
SSH1-207ENST00000547862 FAHD2BQ6P2I3 314 aaPredicted RBP17.41■□□□□ 0.38
SSH1-207ENST00000547862 PATL1Q86TB9 770 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms