RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ARF1P84077 181 aaKnown RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF684Q5T5D7 378 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 STPG1Q5TH74 334 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 C18orf63Q68DL7 685 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 SPAG16Q8N0X2 631 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 CSNK2A3Q8NEV1 391 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 OR4D10Q8NGI6 311 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 OR5D14Q8NGL3 314 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 OR5M9Q8NGP3 310 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 GPR148Q8TDV2 347 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 FBXO17Q96EF6 278 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 OR52A5Q9H2C5 316 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 MYEF2Q9P2K5 600 aaKnown RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 RANBP2P49792 3224 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 GFYI3L273 518 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 DSCR3O14972 297 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 NSA2O95478 260 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 CELA2BP08218 269 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 NME1P15531 152 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 TACR1P25103 407 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 TGM4P49221 684 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 MEOX2P50222 304 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 BIDP55957 195 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ATXN7L3Q14CW9 347 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ACOT11Q8WXI4 607 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 TRMT61AQ96FX7 289 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 SLC41A2Q96JW4 573 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 LURAP1Q96LR2 239 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 TSNAXQ99598 290 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 SLIRPQ9GZT3 109 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 EVA1AQ9H8M9 152 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 GALNT9Q9HCQ5 603 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 GFOD1Q9NXC2 390 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF69Q9UC07 566 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 KANTRA0A1W2PQU2 76 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 METTL15A6NJ78 407 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 UCHL1P09936 223 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ALDOCP09972 364 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 BMP5P22003 454 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 S100A12P80511 92 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 PPA1Q15181 289 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 LIPKQ5VXJ0 399 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 OR7E24Q6IFN5 339 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ABHD17CQ6PCB6 329 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 PODNL1Q6PEZ8 512 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 FAM57BQ71RH2 274 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 OR2T11Q8NH01 316 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 STOML3Q8TAV4 291 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 CNOT9Q92600 299 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 DPAGT1Q9H3H5 408 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 CSNK1G3Q9Y6M4 447 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 IGLV3-16A0A075B6K0 115 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 LRRN3E7EW58 273 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 M0R1B8 84 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ATXN7O15265 892 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 C1QBP02746 253 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 CAPN3P20807 821 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 CHMP24386 653 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 S100A7P31151 101 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 PIGAP37287 484 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 SYPL1Q16563 259 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 SLCO4C1Q6ZQN7 724 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 Q6ZSR9 355 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 OR5H2Q8NGV7 314 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 FGF11Q92914 225 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF583Q96ND8 569 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 INPP5KQ9BT40 448 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 QRSL1Q9H0R6 528 aaKnown RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 C11orf54Q9H0W9 315 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 C1orf198Q9H425 327 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 TUBB1Q9H4B7 451 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 KCNJ16Q9NPI9 418 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 MEPEQ9NQ76 525 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-218ENST00000545889 B3GAT1Q9P2W7 334 aa7.89□□□□□ -1.15
CLIP1-218ENST00000545889 DLGAP1O14490 977 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 VAMP5O95183 116 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZGLP1P0C6A0 271 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 FKBP2P26885 142 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 C21orf33P30042 268 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZXDAP98168 799 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF92Q03936 586 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 OR1Q1Q15612 314 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 CYB5R2Q6BCY4 276 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PGAP1Q75T13 922 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 MARCH3Q86UD3 253 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 LURAP1LQ8IV03 231 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 FBXL14Q8N1E6 418 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 GLYATL2Q8WU03 294 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 MS4A8Q9BY19 250 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 NIPAL2Q9H841 368 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PLA2G3Q9NZ20 509 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TRAPPC2LQ9UL33 140 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 NDRG4Q9ULP0 352 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SLC6A5Q9Y345 797 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PCDHGA5Q9Y5G8 931 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms