RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ARHGAP24Q8N264 748 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 FAM156AQ8NDB6 213 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 NOXO1Q8NFA2 376 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ASB10Q8WXI3 467 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 MCUR1Q96AQ8 359 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CCT8L2Q96SF2 557 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 SEPHS2Q99611 448 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ALG12Q9BV10 488 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CACNG6Q9BXT2 260 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 MRPL13Q9BYD1 178 aaKnown RBP10.27□□□□□ -0.77
HDAC4-216ENST00000544989 KCNN2Q9H2S1 579 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 TXNIPQ9H3M7 391 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 C1orf198Q9H425 327 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF442Q9H7R0 627 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 SMURF2Q9HAU4 748 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CA10Q9NS85 328 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 B3GNT2Q9NY97 397 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 IGHV2OR16-5A0A0B4J2B6 119 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 EFCAB9A8MZ26 197 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 B9A039 149 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 H7C1Q1 480 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 FAM107AO95990 144 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 IGHV4-39P01824 125 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 IGHMP01871 453 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 F13BP05160 661 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 H1F0P07305 194 aaKnown RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 ERCC1P07992 297 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 QDPRP09417 244 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 B4GALT1P15291 398 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 NCK1P16333 377 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 NPR2P20594 1047 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 GUCA1AP43080 201 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF133P52736 654 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 NUDT6P53370 316 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 RPS23P62266 143 aaKnown RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 TUBA1BP68363 451 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 TUBA4AP68366 448 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 MELKQ14680 651 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 EFNB3Q15768 340 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 SLC36A2Q495M3 483 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 C10orf128Q5T292 105 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 TMEM53Q6P2H8 277 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 TUBA1AQ71U36 451 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 RBP7Q96R05 134 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 NMNAT1Q9HAN9 279 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-216ENST00000544989 MAN2C1Q9NTJ4 1040 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 TMEM38BQ9NVV0 291 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 EGFL7Q9UHF1 273 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 FKBP7Q9Y680 259 aa10.26□□□□□ -0.77
HDAC4-216ENST00000544989 A0A087WUU8 490 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 SLC22A23A1A5C7 686 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 J3KTA2 159 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 FFAR1O14842 300 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 AHCYL1O43865 530 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 TRMUO75648 421 aaKnown RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 PRSS23O95084 383 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 HLA-HP01893 362 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 HEXAP06865 529 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 YAP1P46937 504 aaKnown RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 PTDSS1P48651 473 aaKnown RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 RPL27P61353 136 aaKnown RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 RAB1AP62820 205 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 GALK2Q01415 458 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 DAG1Q14118 895 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 MTX3Q5HYI7 312 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 THEM4Q5T1C6 240 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 ARMC4Q5T2S8 1044 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 CLEC2AQ6UVW9 174 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 CLEC9AQ6UXN8 241 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 TMPRSS11FQ6ZWK6 438 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 CCDC197Q8NCU1 140 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 OR1J2Q8NGS2 313 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 MCHR2Q969V1 340 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 PYURFQ96I23 114 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 NSMCE2Q96MF7 247 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 CDRT15Q96T59 188 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 RHNO1Q9BSD3 238 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 LRMDAQ9H2I8 198 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 MUC13Q9H3R2 512 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 MYOZ1Q9NP98 299 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 ARL8BQ9NVJ2 186 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 NDUFAF4Q9P032 175 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
HDAC4-216ENST00000544989 RHCGQ9UBD6 479 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 CD300AQ9UGN4 299 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 SNX13Q9Y5W8 968 aa10.25□□□□□ -0.77
HDAC4-216ENST00000544989 MXRA5Q9NR99 2828 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 TRIM64A6NGJ6 449 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 TRIM64BA6NI03 449 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 PIP5K1CO60331 668 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SEC14L2O76054 403 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SERPINA5P05154 406 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 OR4A8P0C604 315 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF14P17017 642 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-216ENST00000544989 TCN1P20061 433 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-216ENST00000544989 NR4A1P22736 598 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 CALCRP30988 508 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms