RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 ZNF511Q8NB15 262 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 NOXO1Q8NFA2 376 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 ADAD1Q96M93 576 aaKnown RBP11.8□□□□□ -0.52
CHFR-221ENST00000542714 RACGAP1Q9H0H5 632 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 LDAHQ9H6V9 325 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 MARCH7Q9H992 704 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 CEP295Q9C0D2 2601 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 TVP23AA6NH52 213 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 NPIPA2E9PIF3 369 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 NPIPA3F8WFD2 350 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 AHCYL1O43865 530 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 SLC16A7O60669 478 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 ZNF432O94892 652 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 CPN1P15169 458 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 MYL12AP19105 171 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 PTGS2P35354 604 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 ATP6V1E1P36543 226 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 TGFBR2P37173 567 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 HCCSP53701 268 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 RPS3AP61247 264 aaKnown RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 ZNF85Q03923 595 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 LINC00303Q3SY05 128 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 OR2G6Q5TZ20 316 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 CARD17Q5XLA6 110 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 RPUSD3Q6P087 351 aaKnown RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 FCRLAQ7L513 359 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 SSX6Q7RTT6 188 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 LHFPL3Q86UP9 236 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 SLC35F2Q8IXU6 374 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 ACBD7Q8N6N7 88 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 OR10H4Q8NGA5 316 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 YIPF6Q96EC8 236 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 SLC25A44Q96H78 314 aaPredicted RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 FOXN4Q96NZ1 517 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 OR2M2Q96R28 347 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 TBX5Q99593 518 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 MND1Q9BWT6 205 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 FAM192AQ9GZU8 254 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 NAA50Q9GZZ1 169 aaKnown RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 RERGLQ9H628 205 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 EXO5Q9H790 373 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 TIGARQ9NQ88 270 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 MRPL22Q9NWU5 206 aaKnown RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 COPS3Q9UNS2 423 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 ERGIC3Q9Y282 383 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 B3GNT3Q9Y2A9 372 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 COA3Q9Y2R0 106 aaPredicted RBP11.79□□□□□ -0.52
CHFR-221ENST00000542714 FLVCR1Q9Y5Y0 555 aa11.79□□□□□ -0.52
CHFR-221ENST00000542714 ARHGAP21Q5T5U3 1957 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 AQP7O14520 342 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 MYL12BO14950 172 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 IGHG1P01857 330 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 GAAP10253 952 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 CRABP1P29762 137 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 NTF4P34130 210 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 LIPAP38571 399 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 CLRN1P58418 232 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 HIST3H3Q16695 136 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 TIGD6Q17RP2 521 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 PHYHD1Q5SRE7 291 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 SLC25A47Q6Q0C1 308 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 SLC16A9Q7RTY1 509 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 HDDC2Q7Z4H3 204 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 CLVS1Q8IUQ0 354 aaPredicted RBP11.78□□□□□ -0.52
CHFR-221ENST00000542714 RNF128Q8TEB7 428 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 ABHD3Q8WU67 409 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 ZCCHC14Q8WYQ9 949 aaKnown RBP11.78□□□□□ -0.52
CHFR-221ENST00000542714 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 COG8Q96MW5 612 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 OPALINQ96PE5 141 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 WDR76Q9H967 626 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 NDUFA13Q9P0J0 144 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 LUZP4Q9P127 313 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 ASPMQ8IZT6 3477 aa11.78□□□□□ -0.52
CHFR-221ENST00000542714 FRYQ5TBA9 3013 aa11.77□□□□□ -0.52
CHFR-221ENST00000542714 A0A1W2PQL4 384 aaPredicted RBP11.77□□□□□ -0.53
CHFR-221ENST00000542714 DAPL1A0PJW8 107 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 ZNF726A6NNF4 738 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 CENPBD1B2RD01 187 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 ZNHIT1O43257 154 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 KHDRBS3O75525 346 aaKnown RBP11.77□□□□□ -0.53
CHFR-221ENST00000542714 AQP8O94778 261 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 SYNGR4O95473 234 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 LALBAP00709 142 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 OR2T7P0C7T2 308 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 TTKP33981 857 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 SELENOPP49908 381 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
CHFR-221ENST00000542714 WNT4P56705 351 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 ACTC1P68032 377 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 ACTA1P68133 377 aa11.77□□□□□ -0.53
CHFR-221ENST00000542714 RASGEF1BQ0VAM2 473 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms