RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 CAPZA1P52907 286 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 RRAS2P62070 204 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 DCDP81605 110 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 ESCO2Q56NI9 601 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 LIPNQ5VXI9 398 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 PMS2CLQ68D20 193 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 SLC18B1Q6NT16 456 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DEGS2Q6QHC5 323 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 TMEM205Q6UW68 189 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 NOXA1Q86UR1 476 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 APCDD1LQ8NCL9 501 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ZNF248Q8NDW4 579 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 NLGN4YQ8NFZ3 816 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 OR2G2Q8NGZ5 317 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DMRTB1Q96MA1 342 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 WDR54Q9H977 334 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 LIN7BQ9HAP6 207 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ALG5Q9Y673 324 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 IGLV1-36A0A0B4J1U3 117 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 A0A0B4J293 547 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 GABARAPH6UMI1 98 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 BET1O15155 118 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ZNF780AO75290 641 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 SCO1O75880 301 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 OR6A2O95222 327 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 HRGP04196 525 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ARSBP15848 533 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DPP4P27487 766 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 HCCSP53701 268 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 NANOS3P60323 173 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 ZNF239Q16600 458 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 PCK2Q16822 640 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 SLC36A2Q495M3 483 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ELFN2Q5R3F8 820 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DNM1P46Q6ZS02 220 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 HDDC2Q7Z4H3 204 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 LURAP1LQ8IV03 231 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ZNF679Q8IYX0 411 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DND1Q8IYX4 353 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 PRR22Q8IZ63 422 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 TOMM5Q8N4H5 51 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 LINC00469Q8N7U9 141 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 OR51L1Q8NGJ5 315 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 OR13C5Q8NGS8 318 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ZNF671Q8TAW3 534 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 RNF128Q8TEB7 428 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 SAP25Q8TEE9 199 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 RGP1Q92546 391 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 AKAP1Q92667 903 aaKnown RBP eCLIP8.91□□□□□ -0.98
SS18-205ENST00000542420 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DDIT4LQ96D03 193 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 OR2M2Q96R28 347 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ABHD1Q96SE0 405 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 NUDT22Q9BRQ3 303 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 GTPBP2Q9BX10 602 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 RTN4RQ9BZR6 473 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 TCF7L1Q9HCS4 588 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 EIF3KQ9UBQ5 218 aaKnown RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 MALT1Q9UDY8 824 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 C5orf42Q9H799 3197 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 LY6G6EA0A0G2JKS1 128 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 A0A1W2PNV4 684 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SNAPC5O75971 98 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 C1QBP02746 253 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 F13BP05160 661 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 FGF5P12034 268 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 GRPRP30550 384 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 GPR85P60893 370 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SSBP1Q04837 148 aaKnown RBP8.9□□□□□ -0.98
SS18-205ENST00000542420 SLC17A1Q14916 467 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 NTRK2Q16620 822 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 FAM199XQ6PEV8 388 aaPredicted RBP8.9□□□□□ -0.98
SS18-205ENST00000542420 PLCZ1Q86YW0 608 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 ZNF511Q8NB15 262 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 OR6N2Q8NGY6 317 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SNAPC3Q92966 411 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 MIB2Q96AX9 1013 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 HAVCR1Q96D42 359 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SCMH1Q96GD3 660 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 MRGPRX4Q96LA9 322 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 PDCD1LG2Q9BQ51 273 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 PRMT8Q9NR22 394 aaPredicted RBP8.9□□□□□ -0.98
SS18-205ENST00000542420 NLKQ9UBE8 527 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 CTSFQ9UBX1 484 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 FOXJ3Q9UPW0 622 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 B3GALT1Q9Y5Z6 326 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 U3KQA8 63 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SEC16AO15027 2179 aa8.9□□□□□ -0.98
SS18-205ENST00000542420 SLC22A23A1A5C7 686 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 IDSB3KWA1 339 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PRAF2O60831 178 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 ZFAND5O76080 213 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 AQP8O94778 261 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 FSTP19883 344 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms