RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 ACTG1P63261 375 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 SMAD2Q15796 467 aaKnown RBP12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 LINC01590Q5TEZ4 76 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 PRAMEF17Q5VTA0 474 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 TMEM205Q6UW68 189 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 ANKRD33Q7Z3H0 272 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 SHISA5Q8N114 240 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 INO80EQ8NBZ0 244 aaPredicted RBP12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 ZNF417Q8TAU3 575 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 DUSP22Q9NRW4 184 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 NOSIPQ9Y314 301 aaKnown RBP12.44□□□□□ -0.42
NPIPA1-206ENST00000541836 IGLON5A6NGN9 336 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ZNF860A6NHJ4 632 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 BRINP1O60477 761 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 PTGFRP43088 359 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 NR0B1P51843 470 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SNRPEP62304 92 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 C2orf76Q3KRA6 126 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 C3orf33Q6P1S2 294 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 VN1R4Q7Z5H5 301 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SAMD14Q8IZD0 417 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SLC43A2Q8N370 569 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 CDRT4Q8N9R6 151 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 EDAQ92838 391 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ARL11Q969Q4 196 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ZDHHC4Q9NPG8 344 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 FBXL21Q9UKT6 434 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 CARHSP1Q9Y2V2 147 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 EML5Q05BV3 1969 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 DOCK9Q9BZ29 2069 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SULT2B1O00204 365 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 CDC40O60508 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ALOX12BO75342 701 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 RPS27P42677 84 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ACAA2P42765 397 aaKnown RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 PRKXP51817 358 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 PNLIPRP2P54317 469 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 INPP5JQ15735 1006 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 PRRT3Q5FWE3 981 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 VWA2Q5GFL6 755 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 TCEAL5Q5H9L2 206 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 KIRREL2Q6UWL6 708 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 TMEFF1Q8IYR6 380 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 GPX8Q8TED1 209 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 GAL3ST3Q96A11 431 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 ZBTB8AQ96BR9 441 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 CNTNAP3BQ96NU0 1288 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 LMF1Q96S06 567 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 NMNAT2Q9BZQ4 307 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 TRIM2Q9C040 744 aa12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 MKKSQ9NPJ1 570 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-206ENST00000541836 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 LOC100509620A0A075B734 347 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 PRRT4C9JH25 899 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 CBR1P16152 277 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 CMPK1P30085 196 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 SCAND1P57086 179 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 RUNX2Q13950 521 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 TMEM52BQ4KMG9 183 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 LPCAT3Q6P1A2 487 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 SLC39A5Q6ZMH5 540 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 KREMEN2Q8NCW0 462 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 CPNE2Q96FN4 548 aaPredicted RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 ZMAT3Q9HA38 289 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 COL4A6Q14031 1691 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 OR4C45A6NMZ5 311 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 OR2T1O43869 369 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 PRICKLE3O43900 615 aaPredicted RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 GNRH1P01148 92 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 MELTFP08582 738 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 TLX1P31314 330 aaPredicted RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 CDKN2AP42771 156 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 VEGFBP49765 207 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 FHL5Q5TD97 284 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 ZCCHC12Q6PEW1 402 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 RBMS3Q6XE24 437 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 DMBX1Q8NFW5 382 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 OR2G2Q8NGZ5 317 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 GPR148Q8TDV2 347 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 TSEN15Q8WW01 171 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 RAB11FIP5Q9BXF6 653 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
NPIPA1-206ENST00000541836 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
NPIPA1-206ENST00000541836 DCNP07585 359 aaKnown RBP12.41□□□□□ -0.42
NPIPA1-206ENST00000541836 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms