RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, human

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-218	ENST00000540784	NR2C1	P13056	603 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	NOS3	P29474	1203 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	MYBPC1	Q00872	1141 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	CD47	Q08722	323 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	CLEC12A	Q5QGZ9	265 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	ALKBH2	Q6NS38	261 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	ANKRD16	Q6P6B7	361 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	KLHL17	Q6TDP4	642 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	C22orf34	Q6ZV56	151 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	SSX8	Q7RTT4	187 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	ICA1L	Q8NDH6	482 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	NOXO1	Q8NFA2	376 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	OR1K1	Q8NGR3	316 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	DNAJC9	Q8WXX5	260 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	BCL2L2	Q92843	193 aa	Predicted RBP	13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	TBC1D23	Q9NUY8	699 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	REV1	Q9UBZ9	1251 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784	CACNA1C	Q13936	2221 aa		13.61	□□□□□ -0.23
DDB1-218	ENST00000540784		A0A096LPE4	126 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784		A0A1W2PPZ6	126 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	ZNF99	A8MXY4	864 aa	Predicted RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	SOX14	O95416	240 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	THBD	P07204	575 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	OSM	P13725	252 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	HOXB1	P14653	301 aa	Predicted RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	POU1F1	P28069	291 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	DAP	P51397	102 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	ZNF84	P51523	738 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	KRR1	Q13601	381 aa	Known RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	SPTAN1	Q13813	2472 aa	Known RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	DAZAP2	Q15038	168 aa	Predicted RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	TAB1	Q15750	504 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	FREM1	Q5H8C1	2179 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	ZNF787	Q6DD87	383 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	FAHD1	Q6P587	224 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	WFDC8	Q8IUA0	241 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	C17orf78	Q8N4C9	275 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	MARVELD3	Q96A59	401 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	RASD2	Q96D21	266 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	BOD1	Q96IK1	185 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	SMURF2	Q9HAU4	748 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	NGB	Q9NPG2	151 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	SLC17A5	Q9NRA2	495 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	OAZ3	Q9UMX2	235 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	BAIAP2	Q9UQB8	552 aa		13.6	□□□□□ -0.23
DDB1-218	ENST00000540784	SLC22A23	A1A5C7	686 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	PRSS37	A4D1T9	235 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	SAC3D1	A6NKF1	404 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	TP53	P04637	393 aa	Predicted RBP	13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	HOXC12	P31275	282 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	CDKN2A	P42771	156 aa	Known RBP	13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	ZNF133	P52736	654 aa	Predicted RBP	13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	UBE2N	P61088	152 aa	Known RBP	13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	PPA1	Q15181	289 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	SLC36A3	Q495N2	470 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	HIKESHI	Q53FT3	197 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	MEST	Q5EB52	335 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	SLC35F1	Q5T1Q4	408 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	C1QTNF12	Q5T7M4	302 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	SLC25A47	Q6Q0C1	308 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	KLHL24	Q6TFL4	600 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	ZNF813	Q6ZN06	617 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	ADCK1	Q86TW2	530 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	WDR31	Q8NA23	367 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	OR2T33	Q8NG76	320 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	OR8D4	Q8NGM9	314 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	OR4K13	Q8NH42	304 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	OR52N5	Q8NH56	324 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	TEX47	Q8TBZ9	253 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	NSMAF	Q92636	917 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	NMD3	Q96D46	503 aa	Known RBP	13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	PLA2G12A	Q9BZM1	189 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	AMDHD2	Q9Y303	409 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784	BAHCC1	Q9P281	2608 aa		13.59	□□□□□ -0.23
DDB1-218	ENST00000540784		A0A1W2PR80	420 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784		H7C1C5	153 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	BHLHE40	O14503	412 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	SLC2A10	O95528	541 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	WNT11	O96014	354 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	REN	P00797	406 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	HIST1H1C	P16403	213 aa	Known RBP	13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	CRYGS	P22914	178 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	GUCA1A	P43080	201 aa	Predicted RBP	13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	GIPR	P48546	466 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	LCN6	P62502	163 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	GINS1	Q14691	196 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	TBRG1	Q3YBR2	411 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	C10orf128	Q5T292	105 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	JAZF1	Q86VZ6	243 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	CCDC36	Q8IYA8	594 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	PQLC1	Q8N2U9	271 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	LNX2	Q8N448	690 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	OR52E2	Q8NGJ4	325 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	FOXB1	Q99853	325 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	OSBPL10	Q9BXB5	764 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	GABARAPL1	Q9H0R8	117 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	KRT84	Q9NSB2	600 aa		13.58	□□□□□ -0.24
DDB1-218	ENST00000540784	VSX1	Q9NZR4	365 aa	Predicted RBP	13.58	□□□□□ -0.24

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