RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPDC1	Q9NQX5	325 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DHCR7	Q9UBM7	475 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DENND4A	Q7Z401	1863 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	THADA	Q6YHU6	1953 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A1W2PR48	441 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NTN3	O00634	580 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NDUFA2	O43678	99 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRAMEF2	O60811	474 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PPP1R3D	O95685	299 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GPR75	O95800	540 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SBK2	P0C263	348 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACHE	P22303	614 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	H2BFS	P57053	126 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CTAG1A	P78358	180 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LGALS3BP	Q08380	585 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BEX5	Q5H9J7	111 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PDSS1	Q5T2R2	415 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC6A19	Q695T7	634 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR7E24	Q6IFN5	339 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MBOAT2	Q6ZWT7	520 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OVCH2	Q7RTZ1	564 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PXK	Q7Z7A4	578 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TPRA1	Q86W33	373 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PDZD9	Q8IXQ8	264 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ABCA7	Q8IZY2	2146 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	COX18	Q8N8Q8	333 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC16A11	Q8NCK7	471 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52L1	Q8NGH7	329 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR1S1	Q8NH92	325 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	STT3B	Q8TCJ2	826 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	STK35	Q8TDR2	534 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MRPS24	Q96EL2	167 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NKX3-1	Q99801	234 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADAT1	Q9BUB4	502 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FN3K	Q9H479	309 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	WDR54	Q9H977	334 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BCL2L10	Q9HD36	194 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM138	Q9NPI0	162 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SIDT1	Q9NXL6	827 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	VCAN	P13611	3396 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR2W5	A6NFC9	320 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM171A2	A8MVW0	826 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		H0YC42	278 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PYCARD-AS1	I3L0S3	204 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GOSR2	O14653	212 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IMPA2	O14732	288 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CREBL2	O60519	120 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NUDT14	O95848	222 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ATP1B1	P05026	303 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FGF2	P09038	288 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	VSIG10L2	P0DP72	767 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GAA	P10253	952 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GABRA1	P14867	456 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FOLR1	P15328	257 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GDI2	P50395	445 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SORD	Q00796	357 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AIMP2	Q13155	320 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF425	Q6IV72	752 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C11orf88	Q6PI97	169 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PAPD4	Q6PIY7	484 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GSG1L	Q6UXU4	331 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DNAAF1	Q8NEP3	725 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SCARB1	Q8WTV0	552 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC35A4	Q96G79	324 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GAL3ST1	Q99999	423 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	USB1	Q9BQ65	265 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PTGES2	Q9H7Z7	377 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SYNPO2L	Q9H987	977 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NOX4	Q9NPH5	578 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACSS1	Q9NUB1	689 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GNG8	Q9UK08	70 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LHX6	Q9UPM6	363 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MOK	Q9UQ07	419 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRBV2	A0A0J9YWF9	115 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A1W2PQM1	296 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AIP	O00170	330 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLF4	O43474	513 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GALR3	O60755	368 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KRT33A	O76009	404 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TGM6	O95932	706 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C4BPB	P20851	252 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FRK	P42685	505 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TNFRSF17	Q02223	184 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLA2G7	Q13093	441 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DYRK1A	Q13627	763 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GK2	Q14410	553 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KCNAB1	Q14722	419 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ELAVL1	Q15717	326 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DMKN	Q6E0U4	476 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ABHD17C	Q6PCB6	329 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MED25	Q71SY5	747 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GID4	Q8IVV7	300 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CMIP	Q8IY22	773 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SHISA5	Q8N114	240 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR4K13	Q8NH42	304 aa		5.15	□□□□□ -1.58

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