RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 OR10A6Q8NH74 314 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 C19orf24Q9BVV8 132 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF416Q9BWM5 594 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 BAG5Q9UL15 447 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 MXRA5Q9NR99 2828 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 GMNCA6NCL1 334 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 BLOC1S5-TXNDC5H3BN57 136 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 DHHO43323 396 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 LILRA1O75019 489 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 TFP02787 698 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-211ENST00000539843 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 CDH15P55291 814 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 TAS2R41P59536 307 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 RIN1Q13671 783 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 CCNIQ14094 377 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 MELKQ14680 651 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 KRTAP24-1Q3LI83 254 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 NRN1LQ496H8 165 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 SHQ1Q6PI26 577 aaKnown RBP13.17□□□□□ -0.3
UBE3B-211ENST00000539843 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 POLR2J2Q9GZM3 115 aaKnown RBP13.17□□□□□ -0.3
UBE3B-211ENST00000539843 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
UBE3B-211ENST00000539843 KAT8Q9H7Z6 458 aaKnown RBP13.17□□□□□ -0.3
UBE3B-211ENST00000539843 NPHS2Q9NP85 383 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 TMEM38BQ9NVV0 291 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 SLCO1C1Q9NYB5 712 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 GRIP1Q9Y3R0 1128 aa13.17□□□□□ -0.3
UBE3B-211ENST00000539843 A0A0G2JND7 137 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 CENPBD1B2RD01 187 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 QDPRP09417 244 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-211ENST00000539843 DRD4P21917 467 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 APLNRP35414 380 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 RAD52P43351 418 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-211ENST00000539843 TMEM33P57088 247 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
UBE3B-211ENST00000539843 TEKQ02763 1124 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 HSF2Q03933 536 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 VMACQ2NL98 169 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 PCGF3Q3KNV8 242 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 TTMPQ5BVD1 217 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 METTL21CQ5VZV1 264 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 ERICH5Q6P6B1 374 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 HDXQ7Z353 690 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 SKA3Q8IX90 412 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 C11orf40Q8WZ69 217 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 THOC1Q96FV9 657 aaKnown RBP13.16□□□□□ -0.3
UBE3B-211ENST00000539843 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-211ENST00000539843 BCL2L14Q9BZR8 327 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 PCDHAC1Q9H158 963 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
UBE3B-211ENST00000539843 FBN1P35555 2871 aaKnown RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 LCKP06239 509 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 ANPEPP15144 967 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 RBM34P42696 430 aaKnown RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 TRIP10Q15642 601 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 FXNQ16595 210 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
UBE3B-211ENST00000539843 NOXO1Q8NFA2 376 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 SYNPRQ8TBG9 265 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 WFDC6Q9BQY6 131 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 FZR1Q9UM11 496 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
UBE3B-211ENST00000539843 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 SNAP29O95721 258 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 MT-ND1P03886 318 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 ASAH2BP0C7U1 165 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 FAM157BP0CG42 384 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 PGA4P0DJD7 388 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 PGA3P0DJD8 388 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 TROVE2P10155 538 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBE3B-211ENST00000539843 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-211ENST00000539843 SELPLGQ14242 412 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-211ENST00000539843 NHLRC1Q6VVB1 395 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 WDR88Q6ZMY6 472 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 CCDC80Q76M96 950 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 CARM1Q86X55 608 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 OR51F2Q8NH61 342 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms