RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LGALS14Q8TCE9 139 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ZDHHC5Q9C0B5 715 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 HRASLSQ9HDD0 168 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 MYO16Q9Y6X6 1858 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 EDIL3O43854 480 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 IGLV3-27P01718 113 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 RPL27P61353 136 aaKnown RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 HTRA3P83110 453 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 IHHQ14623 411 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 C6orf15Q6UXA7 325 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 SLC46A3Q7Z3Q1 461 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 LAX1Q8IWV1 398 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF808Q8N4W9 903 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 OR1S2Q8NGQ3 325 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PAPPAQ13219 1627 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 NUP214P35658 2090 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 F6UZH7 168 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 HSPB6O14558 160 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 RAF1P04049 648 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 CCL11P51671 97 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 CST9LP1Q5W188 147 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 NAXDQ8IW45 347 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PRSS35Q8N3Z0 413 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 RBMXL3Q8N7X1 1067 aaKnown RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 MORN4Q8NDC4 146 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 OR6M1Q8NGM8 313 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 SLAMF9Q96A28 289 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 CXXC1Q9P0U4 656 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 TUBGCP6Q96RT7 1819 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 A6NIN4 97 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PAPLNO95428 1278 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 MAKP20794 623 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ACVR1Q04771 509 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 EGR3Q06889 387 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 GAB1Q13480 694 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 SMAD4Q13485 552 aaKnown RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF266Q14584 549 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 C9orf135Q5VTT2 229 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 C1orf140Q5VVS0 124 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 LINC00299Q6ZSB3 139 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 DPPA2Q7Z7J5 298 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 NAA40Q86UY6 237 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 SECTM1Q8WVN6 248 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 TMEM106AQ96A25 262 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 BARHL1Q9BZE3 327 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PDFQ9HBH1 243 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 RBFOX1Q9NWB1 397 aaKnown RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 A0A087WV62 115 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ACOT8O14734 319 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PIP5K1CO60331 668 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 PMS2P2O95744 297 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 GLAP06280 429 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 CD53P19397 219 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 ELK1P19419 428 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 DUSP5Q16690 384 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 NKAIN1Q4KMZ8 207 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 SYT6Q5T7P8 510 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-207ENST00000539563 TBPL2Q6SJ96 375 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 OR13F1Q8NGS4 319 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 EMC7Q9NPA0 242 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 OSGIN1Q9UJX0 560 aa5.97□□□□□ -1.45
LSAMP-207ENST00000539563 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 DSCR3O14972 297 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 DEGS1O15121 323 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 SPINT2O43291 252 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 TNFSF12O43508 249 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 OR8U8P0C7N1 319 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF728P0DKX0 622 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 ITGB8P26012 769 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 CD1CP29017 333 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 OR8B8Q15620 311 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 XKR7Q5GH72 579 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 GPR155Q7Z3F1 870 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 OR1E3Q8WZA6 343 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 MVB12AQ96EY5 273 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 CSF3RQ99062 836 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 PHF7Q9BWX1 381 aaPredicted RBP5.96□□□□□ -1.45
LSAMP-207ENST00000539563 SMIM3Q9BZL3 60 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 ZCCHC4Q9H5U6 513 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 CHST11Q9NPF2 352 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 MMP17Q9ULZ9 603 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 PMS2P1A4D2B8 440 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 P2RY10O00398 339 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 PIPP12273 146 aaPredicted RBP5.96□□□□□ -1.45
LSAMP-207ENST00000539563 RFX2P48378 723 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 SMN1Q16637 294 aaKnown RBP5.96□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF628Q5EBL2 1059 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 DCXRQ7Z4W1 244 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 MARCH3Q86UD3 253 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 HSD17B8Q92506 261 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 EMG1Q92979 244 aaKnown RBP5.96□□□□□ -1.45
LSAMP-207ENST00000539563 SDF2Q99470 211 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 KCNJ15Q99712 375 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 NPFFR2Q9Y5X5 522 aa5.96□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF705FA8MVS1 300 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TGM6O95932 706 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CTXN2P0C2S0 81 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF705DP0CH99 300 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF705BP0CI00 300 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms