RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CLRN1P58418 232 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 PSME3P61289 254 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 PPP2R2BQ00005 443 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 KRTAP1-1Q07627 177 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 DAG1Q14118 895 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 TRAM2Q15035 370 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FAM205BPQ63HN1 556 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 LRFN4Q6PJG9 635 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 CPLX4Q7Z7G2 160 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 RNF113BQ8IZP6 322 aaKnown RBP10.01□□□□□ -0.81
RTN3-209ENST00000538995 SLC22A24Q8N4F4 322 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FAM156AQ8NDB6 213 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FAM168AQ92567 244 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FAM162AQ96A26 154 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 BPIFA2Q96DR5 249 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 HSH2DQ96JZ2 352 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FNDC11Q9BVV2 318 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 FAM107BQ9H098 131 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 SMURF2Q9HAU4 748 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 MAN2C1Q9NTJ4 1040 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 GMPR2Q9P2T1 348 aaKnown RBP10.01□□□□□ -0.81
RTN3-209ENST00000538995 RPS6KA6Q9UK32 745 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 SPEF1Q9Y4P9 236 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 JMJD1CQ15652 2540 aa10.01□□□□□ -0.81
RTN3-209ENST00000538995 A0A096LNT2 108 aa10□□□□□ -0.81
RTN3-209ENST00000538995 NDUFS8O00217 210 aa10□□□□□ -0.81
RTN3-209ENST00000538995 FFAR1O14842 300 aa10□□□□□ -0.81
RTN3-209ENST00000538995 PIP5K1CO60331 668 aa10□□□□□ -0.81
RTN3-209ENST00000538995 TRMUO75648 421 aaKnown RBP10□□□□□ -0.81
RTN3-209ENST00000538995 PRSS23O95084 383 aa10□□□□□ -0.81
RTN3-209ENST00000538995 IGHMP01871 453 aa10□□□□□ -0.81
RTN3-209ENST00000538995 TP53P04637 393 aaPredicted RBP10□□□□□ -0.81
RTN3-209ENST00000538995 SERPINA5P05154 406 aa10□□□□□ -0.81
RTN3-209ENST00000538995 F13BP05160 661 aa10□□□□□ -0.81
RTN3-209ENST00000538995 QDPRP09417 244 aa10□□□□□ -0.81
RTN3-209ENST00000538995 IFI30P13284 250 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ZNF35P13682 527 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ACADSP16219 412 aa10□□□□□ -0.81
RTN3-209ENST00000538995 NR4A1P22736 598 aa10□□□□□ -0.81
RTN3-209ENST00000538995 THBS4P35443 961 aa10□□□□□ -0.81
RTN3-209ENST00000538995 GIPRP48546 466 aa10□□□□□ -0.81
RTN3-209ENST00000538995 PTDSS1P48651 473 aaKnown RBP10□□□□□ -0.81
RTN3-209ENST00000538995 SLC9A3P48764 834 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ZNF84P51523 738 aa10□□□□□ -0.81
RTN3-209ENST00000538995 RPS23P62266 143 aaKnown RBP10□□□□□ -0.81
RTN3-209ENST00000538995 RAB1AP62820 205 aa10□□□□□ -0.81
RTN3-209ENST00000538995 LOXL1Q08397 574 aaPredicted RBP10□□□□□ -0.81
RTN3-209ENST00000538995 SNTB2Q13425 540 aaKnown RBP10□□□□□ -0.81
RTN3-209ENST00000538995 ALG10Q5BKT4 473 aa10□□□□□ -0.81
RTN3-209ENST00000538995 C10orf128Q5T292 105 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ARMC4Q5T2S8 1044 aa10□□□□□ -0.81
RTN3-209ENST00000538995 VHLLQ6RSH7 139 aa10□□□□□ -0.81
RTN3-209ENST00000538995 FKBP9P1Q75LS8 142 aa10□□□□□ -0.81
RTN3-209ENST00000538995 CYP4Z1Q86W10 505 aa10□□□□□ -0.81
RTN3-209ENST00000538995 NRMQ8IXM6 262 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ZNF525Q8N782 197 aa10□□□□□ -0.81
RTN3-209ENST00000538995 MOSPD2Q8NHP6 518 aa10□□□□□ -0.81
RTN3-209ENST00000538995 FNDC8Q8TC99 324 aa10□□□□□ -0.81
RTN3-209ENST00000538995 C10orf105Q8TEF2 133 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ACOT11Q8WXI4 607 aaPredicted RBP10□□□□□ -0.81
RTN3-209ENST00000538995 MCHR2Q969V1 340 aa10□□□□□ -0.81
RTN3-209ENST00000538995 SORCS2Q96PQ0 1159 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ALG12Q9BV10 488 aa10□□□□□ -0.81
RTN3-209ENST00000538995 TXNIPQ9H3M7 391 aa10□□□□□ -0.81
RTN3-209ENST00000538995 C1orf198Q9H425 327 aa10□□□□□ -0.81
RTN3-209ENST00000538995 ENPP4Q9Y6X5 453 aa10□□□□□ -0.81
RTN3-209ENST00000538995 HEATR1Q9H583 2144 aaKnown RBP10□□□□□ -0.81
RTN3-209ENST00000538995 hCG_2039718K7EN88 272 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 TLX2O43763 284 aaPredicted RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 CD5LO43866 347 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 GMNNO75496 209 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 ERCC1P07992 297 aaPredicted RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 SAGP10523 405 aaPredicted RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 EVX1P49640 407 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 PDLIM4P50479 330 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 MRPS34P82930 218 aaKnown RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 GALK2Q01415 458 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 PRKCDQ05655 676 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 RUNX1T1Q06455 604 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 PIGFQ07326 219 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 FXNQ16595 210 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SLC36A2Q495M3 483 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 KRT80Q6KB66 452 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 TMEM53Q6P2H8 277 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 ZNF730Q6ZMV8 503 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 MBOAT2Q6ZWT7 520 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SKA3Q8IX90 412 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 OR4K5Q8NGD3 323 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 HTRA1Q92743 480 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 ZNF347Q96SE7 839 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 KCNK17Q96T54 332 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 NDEL1Q9GZM8 345 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 RAB1BQ9H0U4 201 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SLC7A8Q9UHI5 535 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SAMD4AQ9UPU9 718 aaKnown RBP9.99□□□□□ -0.81
RTN3-209ENST00000538995 TMEM5Q9Y2B1 443 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 CMAHPQ9Y471 501 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SNX13Q9Y5W8 968 aa9.99□□□□□ -0.81
RTN3-209ENST00000538995 SONP18583 2426 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms