RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 HMGN1P05114 100 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 FUT1P19526 365 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 EIF1P41567 113 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 GZMKP49863 264 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 RASGEF1BQ0VAM2 473 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 CAMK2DQ13557 499 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 TRAM2Q15035 370 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 AANATQ16613 207 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 LRIF1Q5T3J3 769 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 C3orf33Q6P1S2 294 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 STX19Q8N4C7 294 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 LRRC46Q96FV0 321 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 ARL5BQ96KC2 179 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 ZNF559Q9BR84 538 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 NAA11Q9BSU3 229 aaPredicted RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 SLIRPQ9GZT3 109 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 ZNF350Q9GZX5 532 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 POLR2J3Q9H1A7 115 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 RNF167Q9H6Y7 350 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 SRA1Q9HD15 236 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 LIPGQ9Y5X9 500 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 ANKHD1Q8IWZ3 2542 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 ZG16O60844 167 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 CCNB2O95067 398 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 ARHGDIBP52566 201 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 CSNK2A1P68400 391 aaPredicted RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 IGLV3-21P80748 117 aaPredicted RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 TIGD6Q17RP2 521 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 OTPQ5XKR4 325 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 CAMKMTQ7Z624 323 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 JAZF1Q86VZ6 243 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 PTOV1Q86YD1 416 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 NKAIN4Q8IVV8 208 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 AQP11Q8NBQ7 271 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 SETD9Q8NE22 299 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 PAQR8Q8TEZ7 354 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 TMEM255BQ8WV15 326 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 RBPMSQ93062 196 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 POLDIP3Q9BY77 421 aaKnown RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 ACTR6Q9GZN1 396 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 NMNAT1Q9HAN9 279 aaPredicted RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 NIT2Q9NQR4 276 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 UBQLN2Q9UHD9 624 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 PFDN2Q9UHV9 154 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 OSGIN1Q9UJX0 560 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 EMC9Q9Y3B6 208 aa7.92□□□□□ -1.14
GGA3-202ENST00000538886 CHCHD2Q9Y6H1 151 aaPredicted RBP7.92□□□□□ -1.14
GGA3-202ENST00000538886 HELZ2Q9BYK8 2649 aaKnown RBP7.91□□□□□ -1.14
GGA3-202ENST00000538886 LOC100130705A0A1B0GUX0 176 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 METTL21EPA6NDL7 271 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 ADAMDEC1O15204 470 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 ZNF16P17020 682 aaPredicted RBP7.91□□□□□ -1.14
GGA3-202ENST00000538886 GGT1P19440 569 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 SLC1A3P43003 542 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 POLR2HP52434 150 aaKnown RBP7.91□□□□□ -1.14
GGA3-202ENST00000538886 MLC1Q15049 377 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 MED22Q15528 200 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TAF13Q15543 124 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TATDN3Q17R31 274 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 GFOD2Q3B7J2 385 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 MRGPRGQ86SM5 289 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 ARHGEF39Q8N4T4 335 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 OR4K5Q8NGD3 323 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 OR10D3Q8NH80 312 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TMEM239Q8WW34 195 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 KLHL15Q96M94 604 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TAAR6Q96RI8 345 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 LMF2Q9BU23 707 aaKnown RBP7.91□□□□□ -1.14
GGA3-202ENST00000538886 MED28Q9H204 178 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 FAM118AQ9NWS6 357 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 CLDN16Q9Y5I7 305 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 COL12A1Q99715 3063 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TRBV23-1A0A0A0MS06 115 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 NME2P1O60361 137 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 FABP1P07148 127 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 NME2P22392 152 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 MSX1P28360 303 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 UQCRFS1P47985 274 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 CLDN17P56750 224 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 LGALS3BPQ08380 585 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 MELKQ14680 651 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 ZSWIM7Q19AV6 140 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 NIPAL3Q6P499 406 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 VHLLQ6RSH7 139 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 GPR137CQ8N3F9 429 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TMEM99Q8N816 258 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 OR9Q2Q8NGE9 314 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 PMM1Q92871 262 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 MED18Q9BUE0 208 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 TTTY10Q9BZA0 68 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 SNTG1Q9NSN8 517 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 NLKQ9UBE8 527 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 POLQO75417 2590 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 ABCA12Q86UK0 2595 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 FREM3P0C091 2139 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 H7C1C5 153 aa7.91□□□□□ -1.14
GGA3-202ENST00000538886 EIF4E2O60573 245 aaKnown RBP7.91□□□□□ -1.14
GGA3-202ENST00000538886 RAP2AP10114 183 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms