RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
USP28-207ENST00000538475 SERTAD3Q9UJW9 196 aa6.1□□□□□ -1.43
USP28-207ENST00000538475 ZNF223Q9UK11 482 aaPredicted RBP6.1□□□□□ -1.43
USP28-207ENST00000538475 TP53TG5Q9Y2B4 290 aa6.1□□□□□ -1.43
USP28-207ENST00000538475 HEATR5AQ86XA9 2040 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 DOCK3Q8IZD9 2030 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TRBV2A0A0J9YWF9 115 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TMEM272A0A1B0GTI8 110 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 A0A1B0GW64 132 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ANTXRLA6NF34 631 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 IDSB3KWA1 339 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 SEC14L6B5MCN3 397 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MKRN2OSH3BPM6 223 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 H7C4K7 107 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 DVL2O14641 736 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PPIHO43447 177 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 NUDT21O43809 227 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 VEGFDO43915 354 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CDC40O60508 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
USP28-207ENST00000538475 ICOSLGO75144 302 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 AKR7A3O95154 331 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 SLC16A8O95907 504 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TBX18O95935 607 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ACTL6AO96019 429 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 GUSBP08236 651 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 SPARCP09486 303 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 FAM157CP0CG43 387 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PET100P0DJ07 73 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CD37P11049 281 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 RAB5AP20339 215 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 S1PR1P21453 382 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 IGFBP6P24592 240 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 PSMB6P28072 239 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CD34P28906 385 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 SLC6A6P31641 620 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 BSGP35613 385 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 AHRP35869 848 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ACVR1BP36896 505 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MAGEB1P43366 347 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TSFMP43897 325 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 PPICP45877 212 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PRLHRP49683 370 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 F2RL1P55085 397 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CASP9P55211 416 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 UCP2P55851 309 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 OR12D2P58182 307 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TAS2R38P59533 333 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ELAVL2Q12926 359 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 RPE65Q16518 533 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 GFOD2Q3B7J2 385 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TMEM35AQ53FP2 167 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 RNASE12Q5GAN4 147 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 CLEC12AQ5QGZ9 265 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ATXN7L2Q5T6C5 722 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 PHF19Q5T6S3 580 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 FAM27D1Q5T7N8 215 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 HIST2H3PS2Q5TEC6 136 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 LIPNQ5VXI9 398 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 C18orf63Q68DL7 685 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 STEAP1BQ6NZ63 245 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 MAMDC2Q7Z304 686 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 GDF7Q7Z4P5 450 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 LYG2Q86SG7 212 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MRPL52Q86TS9 123 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 SLC25A42Q86VD7 318 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 FAM129CQ86XR2 697 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 VRK3Q8IV63 474 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 NRMQ8IXM6 262 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CLEC1AQ8NC01 280 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 C17orf47Q8NEP4 570 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 BBS1Q8NFJ9 593 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 OR4K17Q8NGC6 315 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 OR2AP1Q8NGE2 309 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 OR1J1Q8NGS3 322 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 OR9A1PQ8NGU1 263 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 LYPD6BQ8NI32 183 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ADAMTS17Q8TE56 1095 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 GPX8Q8TED1 209 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 C2CD4CQ8TF44 421 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ZNF480Q8WV37 535 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MITD1Q8WV92 249 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PIGKQ92643 395 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 RAB8BQ92930 207 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PTX4Q96A99 478 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 EXOSC8Q96B26 276 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 ZBTB8AQ96BR9 441 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ZNF689Q96CS4 500 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 ALG14Q96F25 216 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PELI1Q96FA3 418 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 ZNF514Q96K75 400 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 DERL3Q96Q80 235 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CNN2Q99439 309 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 STACQ99469 402 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 PHB2Q99623 299 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MCHR1Q99705 422 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 MS4A8Q9BY19 250 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms