RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CFAP77Q6ZQR2 320 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 FAM214BQ7L5A3 538 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SSX9Q7RTT3 188 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZBTB46Q86UZ6 589 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 LILRA2Q8N149 483 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR9I1Q8NGQ6 314 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 AKR7LQ8NHP1 331 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 MAGEE2Q8TD90 523 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 THRSPQ92748 146 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TNFRSF14Q92956 283 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DUS3LQ96G46 650 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TPD52L3Q96J77 140 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DCLRE1CQ96SD1 692 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 NPAS2Q99743 824 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TTYH2Q9BSA4 534 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF416Q9BWM5 594 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ENKD1Q9H0I2 346 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ABCB9Q9NP78 766 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DCAF13Q9NV06 445 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF346Q9UL40 294 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 HRH3Q9Y5N1 445 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CEPT1Q9Y6K0 416 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 HEATR5BQ9P2D3 2071 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 IGKV3D-15A0A087WSY6 115 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1B0GTH9 108 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CIB4A0PJX0 185 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PHYHO14832 338 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SGCEO43556 437 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CLPXO76031 633 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 NDUFB2O95178 105 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 GADD45GO95257 159 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PLATP00750 562 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CDK1P06493 297 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CHRM4P08173 479 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RAB4AP20338 218 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 UQCRC1P31930 480 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CEACAM8P31997 349 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ARR3P36575 388 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PRRX1P54821 245 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 GAS1P54826 345 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 MTPNP58546 118 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 FOXF1Q12946 379 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ECH1Q13011 328 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DGCR6Q14129 220 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 KCTD19Q17RG1 926 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 BEX5Q5H9J7 111 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 FGD3Q5JSP0 725 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 WIPI1Q5MNZ9 446 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 FNDC7Q5VTL7 733 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DEF8Q6ZN54 512 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 AAED1Q7RTV5 226 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PXKQ7Z7A4 578 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 YRDCQ86U90 279 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF786Q8N393 782 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PACRGLQ8N7B6 248 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 FAM169BQ8N8A8 192 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ATG16L2Q8NAA4 619 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR10H5Q8NGA6 315 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR4F15Q8NGB8 312 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR6N1Q8NGY5 312 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM239Q8WW34 195 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SMPDL3BQ92485 455 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 HSD17B8Q92506 261 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 Q96MT0 163 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TIMP4Q99727 224 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SOX7Q9BT81 388 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 THTPAQ9BU02 230 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ALX4Q9H161 411 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OPA3Q9H6K4 179 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 BARX1Q9HBU1 254 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PCDHB16Q9NRJ7 776 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RIMS3Q9UJD0 308 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SEC16AO15027 2179 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SDK2Q58EX2 2172 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 A0A0B4J2E0 115 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1B0GWA3 101 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1B0GX12 115 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PGPEP1LA6NFU8 196 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM200CA6NKL6 621 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RIIAD1A6NNX1 92 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 LEUTXA8MZ59 168 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 H0YAE9 185 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TNFRSF11BO00300 401 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TCAPO15273 167 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SLC16A6O15403 523 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 GPRIN2O60269 458 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CYTIPO60759 359 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PTBP3O95758 552 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SERPINA1P01009 418 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 GSTP1P09211 210 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 INHBBP09529 407 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR4E1P0C645 316 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CD1EP15812 388 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CPT2P23786 658 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CSNK1A1P48729 337 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RGS6P49758 472 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RAB13P51153 203 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TDGF1P3P51864 188 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SPIBQ01892 262 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms