RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 EFSO43281 561 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GUSBP08236 651 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 S100A1P23297 94 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 C21orf33P30042 268 aaPredicted RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 AVPR2P30518 371 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 TRIM23P36406 574 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 TNK1Q13470 666 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SSPNQ14714 243 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 UBE2NLQ5JXB2 153 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SPRED1Q7Z699 444 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 SULF2Q8IWU5 870 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GPBAR1Q8TDU6 330 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 NARFLQ9H6Q4 476 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 PRMT8Q9NR22 394 aaPredicted RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 ZNF346Q9UL40 294 aaKnown RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 TTC3P53804 2025 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 DLEC1Q9Y238 1755 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 PIGBOS1A0A0B4J2F0 54 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 HSD17B6O14756 317 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 ADAM23O75077 832 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 TPPPO94811 219 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 GSTP1P09211 210 aaKnown RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 PRKACAP17612 351 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 ARR3P36575 388 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 FOXF1Q12946 379 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 OTPQ5XKR4 325 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 NLRP8Q86W28 1048 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 KISS1RQ969F8 398 aaPredicted RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 RNF170Q96K19 258 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 FAM173AQ9BQD7 235 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 RTL8AQ9BWD3 113 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 ANKRD60Q9BZ19 345 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 MOV10Q9HCE1 1003 aaKnown RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R16Q9NYV7 291 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 MYOTQ9UBF9 498 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 SLC5A6Q9Y289 635 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 PCDHGA5Q9Y5G8 931 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 COL11A1P12107 1806 aaPredicted RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 TRAV17A0A0B4J275 112 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 UPK1AO00322 258 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 DEGS1O15121 323 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 NXPH3O95157 252 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 MT-ND4P03905 459 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 CSF1P09603 554 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 OR2T7P0C7T2 308 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 ZNF91Q05481 1191 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 SFRP5Q5T4F7 317 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 PWWP2BQ6NUJ5 590 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 GPR155Q7Z3F1 870 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 GCNT2Q8N0V5 402 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 OR2T27Q8NH04 317 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 VN1R1Q9GZP7 353 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 FAIMQ9NVQ4 179 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 PAQR5Q9NXK6 330 aaPredicted RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 NLKQ9UBE8 527 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 CBR3O75828 277 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 OLFM2O95897 454 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 LGI1O95970 557 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 CRYAAP02489 173 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 TP53P04637 393 aaPredicted RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 NID1P14543 1247 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 GNB1P62873 340 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 ZNF616Q08AN1 781 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 FXNQ16595 210 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 DUSP7Q16829 419 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 DCUN1D4Q92564 292 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 MAELQ96JY0 434 aaKnown RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 NKX3-1Q99801 234 aaPredicted RBP4.9□□□□□ -1.63
LRP6-203ENST00000538239 CACNG6Q9BXT2 260 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 HSPB11Q9Y547 144 aa4.9□□□□□ -1.63
LRP6-203ENST00000538239 DNAJB6O75190 326 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 SLC34A2O95436 690 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TK1P04183 234 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TBXA2RP21731 343 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 FKBP2P26885 142 aaKnown RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 DSCR4P56555 118 aaPredicted RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 RPS25P62851 125 aaKnown RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 RAB31Q13636 194 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 ALKBH1Q13686 389 aaKnown RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 PELI3Q8N2H9 469 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 SNAPC3Q92966 411 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 ZBTB8AQ96BR9 441 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 MSI2Q96DH6 328 aaKnown RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 SPACA9Q96E40 222 aaPredicted RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 GPR78Q96P69 363 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TMEM59Q9BXS4 323 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 HIPK2Q9H2X6 1198 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 MED29Q9NX70 200 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TIMM10BQ9Y5J6 103 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 A0A1W2PR80 420 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TSPAN11A1L157 253 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 M0R233 179 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 GLCEO94923 617 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 UBCP0CG48 685 aaKnown RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 BLVRBP30043 206 aaPredicted RBP4.89□□□□□ -1.63
LRP6-203ENST00000538239 NXNL2Q5VZ03 156 aa4.89□□□□□ -1.63
LRP6-203ENST00000538239 TMEM200AQ86VY9 491 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms