RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 IDH3AP50213 366 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 DNAJB13P59910 316 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 PIGFQ07326 219 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 RBBP4Q09028 425 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 CEACAM7Q14002 265 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 LASP1Q14847 261 aaKnown RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 IMPG1Q17R60 797 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 PIP4P2Q8N4L2 257 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZNF781Q8N8C0 355 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 SCCPDHQ8NBX0 429 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 PIK3C3Q8NEB9 887 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 Q8NFD4 153 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 CCDC126Q96EE4 140 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 GPR61Q9BZJ8 451 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 BCL2L14Q9BZR8 327 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 TOR3AQ9H497 397 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 A4GALTQ9NPC4 353 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 BAIAP2L1Q9UHR4 511 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 TAGLN3Q9UI15 199 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 RCE1Q9Y256 329 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 POFUT2Q9Y2G5 429 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 TMEM72A0PK05 275 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 GYG2O15488 501 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 DUS4LO95620 317 aaKnown RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 AK1P00568 194 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 HMGN2P05204 90 aaKnown RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 CHRM4P08173 479 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 UQCRBP14927 111 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 IGLL1P15814 213 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ATP5F1P24539 256 aaPredicted RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 LMO1P25800 156 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 LIPAP38571 399 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 IER3P46695 156 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 SEC61A1P61619 476 aaKnown RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 GLO1Q04760 184 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 GPR68Q15743 365 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ZMAT1Q5H9K5 638 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 CFAP157Q5JU67 520 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 EPGNQ6UW88 154 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 PIWIL3Q7Z3Z3 882 aaKnown RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 LRRC28Q86X40 367 aaPredicted RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 LDLRAD3Q86YD5 345 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ARHGAP24Q8N264 748 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 C11orf44Q8N8P7 122 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ICA1LQ8NDH6 482 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 OR1J2Q8NGS2 313 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 METTL6Q8TCB7 284 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 IPCEF1Q8WWN9 437 aaPredicted RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 OIT3Q8WWZ8 545 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 PPCDCQ96CD2 204 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ITPKCQ96DU7 683 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 NUDT16L1Q9BRJ7 211 aaKnown RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 SLC19A3Q9BZV2 496 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 ACOXLQ9NUZ1 547 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 B3GNT2Q9NY97 397 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 CAB39Q9Y376 341 aaPredicted RBP7.67□□□□□ -1.18
USP28-205ENST00000537706 FAM96BQ9Y3D0 163 aa7.67□□□□□ -1.18
USP28-205ENST00000537706 WI2-2373I1.2A0A1W2PRP0 233 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RBMY1BA6NDE4 496 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF503-AS2A6NEH8 195 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RBMY1EA6NEQ0 496 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 HDAC3O15379 428 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ENO1P06733 434 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 CHRNGP07510 517 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RBMY1DP0C7P1 496 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 MDH2P40926 338 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 RPL14P50914 215 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 CLDN17P56750 224 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 FGF12P61328 243 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 BTG1P62324 171 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RAB1AP62820 205 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF141Q15928 474 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 SPDYE7PQ495Y7 208 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 DNAL1Q4LDG9 190 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ATP6AP1LQ52LC2 224 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 EXOSC6Q5RKV6 272 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 METTL21CQ5VZV1 264 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF813Q6ZN06 617 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RNF144BQ7Z419 303 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 SLC22A9Q8IVM8 553 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 DDIASQ8IXT1 998 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 KIRREL3Q8IZU9 778 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 BHLHE22Q8NFJ8 381 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 OR56A1Q8NGH5 318 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 CFHR4Q92496 578 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 MCUR1Q96AQ8 359 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 C3orf30Q96M34 536 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 CADM1Q9BY67 442 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 C1orf198Q9H425 327 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 TMEM106BQ9NUM4 274 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 LIPT2A6NK58 231 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RNASEK-C17orf49H0YIS7 233 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 GSC2O15499 205 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 PTHP01270 115 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 IGHV1-46P01743 117 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RPS2P15880 293 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF43P17038 809 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 TNFSF4P23510 183 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 GTF2E2P29084 291 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms