RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 NAXEQ8NCW5 288 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 SMAP2Q8WU79 429 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 NSMAFQ92636 917 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 WNT2BQ93097 391 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 INTS12Q96CB8 462 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 C12orf49Q9H741 205 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 SHANK1Q9Y566 2161 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 IGLV1-36A0A0B4J1U3 117 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 CD8B2A6NJW9 211 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 FIGNL2A6NMB9 653 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF724A8MTY0 619 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 M0R3G1 203 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 PRRG2O14669 202 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 PRODHO43272 600 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 SS18L1O75177 396 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 PRB1P04280 392 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 GABRA1P14867 456 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 CRHBPP24387 322 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC25A1P53007 311 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 CDH15P55291 814 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 RPS7P62081 194 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 MVKQ03426 396 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 HIST3H3Q16695 136 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 LINC01590Q5TEZ4 76 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 LRFN4Q6PJG9 635 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 MEPCEQ7L2J0 689 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 TMEM54Q969K7 222 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 TMEM45BQ96B21 275 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 ZMYND19Q96E35 227 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF837Q96EG3 531 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 ADAD1Q96M93 576 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 EMC3Q9P0I2 261 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 FOXD3Q9UJU5 478 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 B9D1Q9UPM9 204 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
SFSWAP-206ENST00000537582 MBD3L4A6NDZ8 208 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MBD3L3A6NE82 208 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MBD3L5A6NJ08 208 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 PTGES3LE9PB15 166 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GPR171O14626 319 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MPZL1O95297 269 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MRPL3P09001 348 aaKnown RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 QDPRP09417 244 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GSTT1P30711 240 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 HTR1FP30939 366 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 TEKQ02763 1124 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GTF3C1Q12789 2109 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MRPL49Q13405 166 aaKnown RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GUSBP1Q15486 140 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 TSPO2Q5TGU0 170 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MEDAGQ5VYS4 303 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 C20orf196Q8IYI0 205 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF511Q8NB15 262 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 OR6K6Q8NGW6 343 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 OR6N1Q8NGY5 312 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MBD3L2Q8NHZ7 208 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GGHQ92820 318 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 MCHR2Q969V1 340 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 RNFT2Q96EX2 444 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GMPPAQ96IJ6 420 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 ALKBH3Q96Q83 286 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 TEAD3Q99594 435 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 ALG12Q9BV10 488 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 GLTPQ9NZD2 209 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 CFAP46Q8IYW2 2715 aa13.84□□□□□ -0.19
SFSWAP-206ENST00000537582 TVP23AA6NH52 213 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 MRPL33O75394 65 aaKnown RBP13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 STSP08842 583 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 GLI4P10075 376 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 PSKH1P11801 424 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 PAX7P23759 505 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 KIR2DL2P43627 348 aaPredicted RBP13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 CENPAP49450 140 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 VWA1Q6PCB0 445 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 B3GNT6Q6ZMB0 384 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 AHSA2Q719I0 299 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 ZBTB46Q86UZ6 589 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 GID4Q8IVV7 300 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 CNEP1R1Q8N9A8 125 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 ST6GALNAC3Q8NDV1 305 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 Q96MT0 163 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 SNX18Q96RF0 628 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 TTYH2Q9BSA4 534 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC7A10Q9NS82 523 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 H2AFY2Q9P0M6 372 aaPredicted RBP13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 ERVK-18Q9QC07 812 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 PRSS50Q9UI38 385 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 PSORS1C1Q9UIG5 152 aa13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 COA3Q9Y2R0 106 aaPredicted RBP13.83□□□□□ -0.19
SFSWAP-206ENST00000537582 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC43A1O75387 559 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 SCG5P05408 212 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 HTR1AP08908 422 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 CDAP32320 146 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC15A1P46059 708 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 FOXG1P55316 489 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms