RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 NANSQ9NR45 359 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 TREM2Q9NZC2 230 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 SLC7A8Q9UHI5 535 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 SLC7A7Q9UM01 511 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 NDUFAF1Q9Y375 327 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 A0A1W2PPW3 197 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 TRAPPC13A5PLN9 417 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 B4DSR2 109 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 TCF21O43680 179 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RP2O75695 350 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 BCL10O95999 233 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 QDPRP09417 244 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ASAH2BP0C7U1 165 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 FAM157BP0CG42 384 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 PGA4P0DJD7 388 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 PGA3P0DJD8 388 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ACHEP22303 614 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 MAGEB1P43366 347 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 GZMMP51124 257 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 CRYBA2P53672 197 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 TMEM33P57088 247 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ERVS71-1P61550 626 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RPS23P62266 143 aaKnown RBP7.24□□□□□ -1.25
USP28-203ENST00000537490 MYBPC1Q00872 1141 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RUNX1T1Q06455 604 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 NFYCQ13952 458 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 UGT2A3Q6UWM9 527 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RINLQ6ZS11 566 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 SLC30A7Q8NEW0 376 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 OR4K5Q8NGD3 323 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 OR10A6Q8NH74 314 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 MCHR2Q969V1 340 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ATP6V1G3Q96LB4 118 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ZNF347Q96SE7 839 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ZNF426Q9BUY5 554 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 OR51B6Q9H340 312 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RABEP2Q9H5N1 569 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 RNF121Q9H920 327 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 LPAR2Q9HBW0 351 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ZNF275Q9NSD4 429 aaPredicted RBP7.24□□□□□ -1.25
USP28-203ENST00000537490 TAAR3PQ9P1P4 343 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 ZNF229Q9UJW7 825 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 FBXL3Q9UKT7 428 aa7.24□□□□□ -1.25
USP28-203ENST00000537490 IGLV3-9A0A075B6K5 115 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 BLOC1S5-TXNDC5H3BN57 136 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 ANGPT2O15123 496 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 PPIHO43447 177 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 CDC14BO60729 498 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 VENTXO95231 258 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 HIST1H2ABP04908 130 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 F13BP05160 661 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 GAAP10253 952 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 SAGP10523 405 aaPredicted RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 UMPSP11172 480 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 FUT1P19526 365 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 TNFRSF1BP20333 461 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 LSP1P33241 339 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 PCGF2P35227 344 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 LMO4P61968 165 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 HIST3H3Q16695 136 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 VMACQ2NL98 169 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 REP15Q6BDI9 236 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 RGS7BPQ6MZT1 257 aaPredicted RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 TMEM53Q6P2H8 277 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 CCDC80Q76M96 950 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 HIST3H2AQ7L7L0 130 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 SLC16A14Q7RTX9 510 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 PATL1Q86TB9 770 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 GLCCI1Q86VQ1 547 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 NKAIN4Q8IVV8 208 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 SLC26A7Q8TE54 656 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 DYDC1Q8WWB3 177 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 STON2Q8WXE9 905 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 GTF3AQ92664 365 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 HIST1H2ACQ93077 130 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 TMEM186Q96B77 213 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 MPP4Q96JB8 637 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 MRPL13Q9BYD1 178 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 SLC19A3Q9BZV2 496 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 PCDHAC1Q9H158 963 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 METTL17Q9H7H0 456 aaPredicted RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 CDH20Q9HBT6 801 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 INTS9Q9NV88 658 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 HIF1ANQ9NWT6 349 aa7.23□□□□□ -1.25
USP28-203ENST00000537490 ZNF346Q9UL40 294 aaKnown RBP7.23□□□□□ -1.25
USP28-203ENST00000537490 SLC22A23A1A5C7 686 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 C17orf100A8MU93 164 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 FBP2O00757 339 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SHOX2O60902 331 aaPredicted RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 ENTPD5O75356 428 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 TRMUO75648 421 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 OR7A10O76100 309 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 FARS2O95363 451 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 IGHG1P01857 330 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 TFP02787 698 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 LCKP06239 509 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 MSMBP08118 114 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 MMP7P09237 267 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms